Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_3259 |
Symbol | |
ID | 5871044 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | + |
Start bp | 3656663 |
End bp | 3657958 |
Gene Length | 1296 bp |
Protein Length | 431 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 641548375 |
Product | major facilitator transporter |
Protein accession | YP_001669487 |
Protein GI | 167034256 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2271] Sugar phosphate permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 0.0867581 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACCGCG CACAAACCCT GACTGGCGCA ATGCCCAGCA CCCTGCCGTT TCGCCTTGCG CAATGGCGCA TGCTGCTGGC CGCGATGTTC TGCTACTTGT TCTTCTACAC CGGGCGGCAA ACCTTCGGCT TCGCCATCCC CGGGATCCAG GCCGAGTTCG GCCTGAGCAA GGAAACCCTC GGCTGGGCCT CCACCGCCAT GCTGTGGATG TATGCCGTTG GCCAAGCCAT CAATGGCAAC CTCGCCGACA AGTTCGGCGG CCGACGCATC ATGAGCATCG GCGCCGTGTT GTCGTGCGGC GCCAACTGGG TCACCAGCTT TGCTGGCGGT TTTCTCAGCC TGATCCTGCC GTGGGGCGTC AACGGTTATT TCCAGGCCCT GGGCTGGGCG CCCGGCAGCC GCCTGCTTTC AAACTGGTGG GGCGCTGCCG AGCGCGGCAA GGTGTATGGC TTCTATGTGT TCGCCGCTGG CTGCGCATCG GTGCTGTCGT ATGTGACCTC GGTGGTGGTG ATCGATGTGC TGCACCTGGA GTGGCGCTGG ATTTTCCGCT TGCCTGTGCT GCTGATGCTG GCCGGTGGCA TCGTCTTCTA CCTGGTGGCG CGGGAGCGCC CGCAAGACAT GGGTTACCCG GCGCTGGACG ACACTGGCGT GGCCAACGCC GAAGACCGTG CCAACGAGGC CAGTCTGGGC GGTGAAGAAA CCTCGCGCCA ACGTTACCTG GCCGTGCTGA AAAACCCGCG CCTGCTGGTG GCAGCGGTGT CATTGGGCTT CCAGAACGCC GCGCGGTACG GCTTGATCGT CTGGGTGCCC GTGCATTTCC TGGGTGCCAA CTGGCAGAAA GGCGACAGTT TCATCGACCC GAAATGGATC ACCATCGCCT TGCCGGTAGG CATGGCCGTT GGCGCGCTGA GCAATGGCTG GGTGTCGGAC AAACTGTTCG GCAGCAAACG TTACCTGGCG ATCATGCTGT ACATGGTGCT GGGCGCGCTC ACCAGCCTGT GGATGTGGAG CCTGCCAGCG CACAGCGCGG TTGGCCTGCT GGCGCTGTTC CTCTGCGGTT TCTTCATCTA CGGCCCGGCA TCGAGCTTCT GGGCGCTGTG CCCGGACCTG GTCGGCGCGC GTCGCGCCGG CACCGCCACC GGCATCATGA ATTTCGCCTC GTACCTGTTC GCCGGGCTGG CAGAGCCGCT GATCGGACGT ATGCTCGACA CCACCGGCAA CACCTCGCTG ATTTTCATCG TGGTCACCAG CGCCTGCGCC TGCAGTGCCC TGGTCGCCCT GTTCGTACGC CGCTGA
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Protein sequence | MNRAQTLTGA MPSTLPFRLA QWRMLLAAMF CYLFFYTGRQ TFGFAIPGIQ AEFGLSKETL GWASTAMLWM YAVGQAINGN LADKFGGRRI MSIGAVLSCG ANWVTSFAGG FLSLILPWGV NGYFQALGWA PGSRLLSNWW GAAERGKVYG FYVFAAGCAS VLSYVTSVVV IDVLHLEWRW IFRLPVLLML AGGIVFYLVA RERPQDMGYP ALDDTGVANA EDRANEASLG GEETSRQRYL AVLKNPRLLV AAVSLGFQNA ARYGLIVWVP VHFLGANWQK GDSFIDPKWI TIALPVGMAV GALSNGWVSD KLFGSKRYLA IMLYMVLGAL TSLWMWSLPA HSAVGLLALF LCGFFIYGPA SSFWALCPDL VGARRAGTAT GIMNFASYLF AGLAEPLIGR MLDTTGNTSL IFIVVTSACA CSALVALFVR R
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