Gene PputGB1_3259 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_3259 
Symbol 
ID5871044 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp3656663 
End bp3657958 
Gene Length1296 bp 
Protein Length431 aa 
Translation table11 
GC content64% 
IMG OID641548375 
Productmajor facilitator transporter 
Protein accessionYP_001669487 
Protein GI167034256 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2271] Sugar phosphate permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.0867581 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCGCG CACAAACCCT GACTGGCGCA ATGCCCAGCA CCCTGCCGTT TCGCCTTGCG 
CAATGGCGCA TGCTGCTGGC CGCGATGTTC TGCTACTTGT TCTTCTACAC CGGGCGGCAA
ACCTTCGGCT TCGCCATCCC CGGGATCCAG GCCGAGTTCG GCCTGAGCAA GGAAACCCTC
GGCTGGGCCT CCACCGCCAT GCTGTGGATG TATGCCGTTG GCCAAGCCAT CAATGGCAAC
CTCGCCGACA AGTTCGGCGG CCGACGCATC ATGAGCATCG GCGCCGTGTT GTCGTGCGGC
GCCAACTGGG TCACCAGCTT TGCTGGCGGT TTTCTCAGCC TGATCCTGCC GTGGGGCGTC
AACGGTTATT TCCAGGCCCT GGGCTGGGCG CCCGGCAGCC GCCTGCTTTC AAACTGGTGG
GGCGCTGCCG AGCGCGGCAA GGTGTATGGC TTCTATGTGT TCGCCGCTGG CTGCGCATCG
GTGCTGTCGT ATGTGACCTC GGTGGTGGTG ATCGATGTGC TGCACCTGGA GTGGCGCTGG
ATTTTCCGCT TGCCTGTGCT GCTGATGCTG GCCGGTGGCA TCGTCTTCTA CCTGGTGGCG
CGGGAGCGCC CGCAAGACAT GGGTTACCCG GCGCTGGACG ACACTGGCGT GGCCAACGCC
GAAGACCGTG CCAACGAGGC CAGTCTGGGC GGTGAAGAAA CCTCGCGCCA ACGTTACCTG
GCCGTGCTGA AAAACCCGCG CCTGCTGGTG GCAGCGGTGT CATTGGGCTT CCAGAACGCC
GCGCGGTACG GCTTGATCGT CTGGGTGCCC GTGCATTTCC TGGGTGCCAA CTGGCAGAAA
GGCGACAGTT TCATCGACCC GAAATGGATC ACCATCGCCT TGCCGGTAGG CATGGCCGTT
GGCGCGCTGA GCAATGGCTG GGTGTCGGAC AAACTGTTCG GCAGCAAACG TTACCTGGCG
ATCATGCTGT ACATGGTGCT GGGCGCGCTC ACCAGCCTGT GGATGTGGAG CCTGCCAGCG
CACAGCGCGG TTGGCCTGCT GGCGCTGTTC CTCTGCGGTT TCTTCATCTA CGGCCCGGCA
TCGAGCTTCT GGGCGCTGTG CCCGGACCTG GTCGGCGCGC GTCGCGCCGG CACCGCCACC
GGCATCATGA ATTTCGCCTC GTACCTGTTC GCCGGGCTGG CAGAGCCGCT GATCGGACGT
ATGCTCGACA CCACCGGCAA CACCTCGCTG ATTTTCATCG TGGTCACCAG CGCCTGCGCC
TGCAGTGCCC TGGTCGCCCT GTTCGTACGC CGCTGA
 
Protein sequence
MNRAQTLTGA MPSTLPFRLA QWRMLLAAMF CYLFFYTGRQ TFGFAIPGIQ AEFGLSKETL 
GWASTAMLWM YAVGQAINGN LADKFGGRRI MSIGAVLSCG ANWVTSFAGG FLSLILPWGV
NGYFQALGWA PGSRLLSNWW GAAERGKVYG FYVFAAGCAS VLSYVTSVVV IDVLHLEWRW
IFRLPVLLML AGGIVFYLVA RERPQDMGYP ALDDTGVANA EDRANEASLG GEETSRQRYL
AVLKNPRLLV AAVSLGFQNA ARYGLIVWVP VHFLGANWQK GDSFIDPKWI TIALPVGMAV
GALSNGWVSD KLFGSKRYLA IMLYMVLGAL TSLWMWSLPA HSAVGLLALF LCGFFIYGPA
SSFWALCPDL VGARRAGTAT GIMNFASYLF AGLAEPLIGR MLDTTGNTSL IFIVVTSACA
CSALVALFVR R