| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_3239 |
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| Symbol | |
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| ID | 5871024 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 3629597 |
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| End bp | 3630922 |
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| Gene Length | 1326 bp |
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| Protein Length | 441 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641548355 |
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| Product | major facilitator transporter |
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| Protein accession | YP_001669467 |
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| Protein GI | 167034236 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2271] Sugar phosphate permease |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 0.935103 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCACT CCAAGATCAC CCCCGCCGCA CCCCGGATGT CCCAGGGTTC GATCGGCGAC
AAGCTTCGCG GCGCCTTCGG CGTCGGCAAA ACCCGTTGGG GCATGCTTGC CCTGGTGTTC
TTCGCCACCA CCCTGAACTA CATCGACCGC GCCGCCCTTG GCATCATGCA GCCCGTGCTG
GCCAAGGAAA TGAGCTGGAC GGCGATGGAC TACGCCAACA TCAATTTCTG GTTCCAGGTC
GGTTACGCCA TCGGCTTTCT GCTGCAGGGC CGGCTGATCG ACAAAGTCGG GGTCAAACGC
GCCTTCTTCT TCGCCGTGCT GCTGTGGAGC CTGGCCACCG GTGCCCATGG CCTGGCTACC
TCGGCGGCAG GTTTCATGGT GTGCCGCTTC ATCCTCGGTC TGACCGAGGC CGCCAACTAC
CCGGCTTGCG TCAAGACCGT GCGCCTGTGG TTCCCAGCGG GTGAGCGAGC GATTGCCACC
GGGTTGTTCA ACGCCGGCAC CAACGTCGGT GCCATGGTCA CCCCGGCCCT GCTGCCGTTG
ATCCTCGCCG TGTGGGGCTG GCAGGCCGCG TTCATCGCCA TGGGCAGCCT GGGCCTGGTA
TGGGTGGTGC TGTGGGTGCT GAAGTACTAC AACCCCGAAG ACCACCCCAG CGTGCGCCAG
AGCGAGGTGC AGTACATCCA GCAGGACGAC GAGCCCGAGC CGACCCGCGT GCCGTTCAGC
CGTATCCTGC GCCTGCGTGG CACCTGGGCG TTTGCAGTGG CCTATGCGAT TACCGCACCG
GTGTTCTGGT TCTACCTGTA CTGGCTGCCG CCATTCCTCA ACCAGCAGTA CAGCCTGGGC
ATCAACGTGA CCCAGATGGG CATCCCGCTG ATCATCATCT GGCTGACGGC GGACTTTGGC
AGCATCGGTG GTGGCATCTT GTCGTCGTGG CTGATTGGCC GTGGCGTGCG TGCCACGACT
GCGCGGCTGG TGTCGATGCT GATCTTCGCC TGCACCATGC TCAGCGTCAT CTTTGCCGCC
AACGCCAGTG GCCTTTGGGT TGCAGTGGCC GCCATCTCGC TGGCCGTGGG CGCGCACCAG
GCGTGGACGG CGAACATCTG GAGCCTGGTG ATGGACTACA CACCCAAGCA CCTGGTGAGC
ACGGTGTTCG GGTTTGGCAG CATGTGCGCG GCGATTGGCG GGATGTTCAT GACGCAAATC
GTCGGCAGCG TGTTGACCGC TACCCACAAC AACTATGCCG TGCTGTTCAC CATGATCCCG
GCCATGTACT TCCTGGCGCT GGTGTGGATG TACTTCATGG CACCGCGCAA GGTCGAGAGC
GCCTGA
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| Protein sequence | MNHSKITPAA PRMSQGSIGD KLRGAFGVGK TRWGMLALVF FATTLNYIDR AALGIMQPVL
AKEMSWTAMD YANINFWFQV GYAIGFLLQG RLIDKVGVKR AFFFAVLLWS LATGAHGLAT
SAAGFMVCRF ILGLTEAANY PACVKTVRLW FPAGERAIAT GLFNAGTNVG AMVTPALLPL
ILAVWGWQAA FIAMGSLGLV WVVLWVLKYY NPEDHPSVRQ SEVQYIQQDD EPEPTRVPFS
RILRLRGTWA FAVAYAITAP VFWFYLYWLP PFLNQQYSLG INVTQMGIPL IIIWLTADFG
SIGGGILSSW LIGRGVRATT ARLVSMLIFA CTMLSVIFAA NASGLWVAVA AISLAVGAHQ
AWTANIWSLV MDYTPKHLVS TVFGFGSMCA AIGGMFMTQI VGSVLTATHN NYAVLFTMIP
AMYFLALVWM YFMAPRKVES A
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