Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_3239 |
Symbol | |
ID | 5871024 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | + |
Start bp | 3629597 |
End bp | 3630922 |
Gene Length | 1326 bp |
Protein Length | 441 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 641548355 |
Product | major facilitator transporter |
Protein accession | YP_001669467 |
Protein GI | 167034236 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2271] Sugar phosphate permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 0.935103 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACCACT CCAAGATCAC CCCCGCCGCA CCCCGGATGT CCCAGGGTTC GATCGGCGAC AAGCTTCGCG GCGCCTTCGG CGTCGGCAAA ACCCGTTGGG GCATGCTTGC CCTGGTGTTC TTCGCCACCA CCCTGAACTA CATCGACCGC GCCGCCCTTG GCATCATGCA GCCCGTGCTG GCCAAGGAAA TGAGCTGGAC GGCGATGGAC TACGCCAACA TCAATTTCTG GTTCCAGGTC GGTTACGCCA TCGGCTTTCT GCTGCAGGGC CGGCTGATCG ACAAAGTCGG GGTCAAACGC GCCTTCTTCT TCGCCGTGCT GCTGTGGAGC CTGGCCACCG GTGCCCATGG CCTGGCTACC TCGGCGGCAG GTTTCATGGT GTGCCGCTTC ATCCTCGGTC TGACCGAGGC CGCCAACTAC CCGGCTTGCG TCAAGACCGT GCGCCTGTGG TTCCCAGCGG GTGAGCGAGC GATTGCCACC GGGTTGTTCA ACGCCGGCAC CAACGTCGGT GCCATGGTCA CCCCGGCCCT GCTGCCGTTG ATCCTCGCCG TGTGGGGCTG GCAGGCCGCG TTCATCGCCA TGGGCAGCCT GGGCCTGGTA TGGGTGGTGC TGTGGGTGCT GAAGTACTAC AACCCCGAAG ACCACCCCAG CGTGCGCCAG AGCGAGGTGC AGTACATCCA GCAGGACGAC GAGCCCGAGC CGACCCGCGT GCCGTTCAGC CGTATCCTGC GCCTGCGTGG CACCTGGGCG TTTGCAGTGG CCTATGCGAT TACCGCACCG GTGTTCTGGT TCTACCTGTA CTGGCTGCCG CCATTCCTCA ACCAGCAGTA CAGCCTGGGC ATCAACGTGA CCCAGATGGG CATCCCGCTG ATCATCATCT GGCTGACGGC GGACTTTGGC AGCATCGGTG GTGGCATCTT GTCGTCGTGG CTGATTGGCC GTGGCGTGCG TGCCACGACT GCGCGGCTGG TGTCGATGCT GATCTTCGCC TGCACCATGC TCAGCGTCAT CTTTGCCGCC AACGCCAGTG GCCTTTGGGT TGCAGTGGCC GCCATCTCGC TGGCCGTGGG CGCGCACCAG GCGTGGACGG CGAACATCTG GAGCCTGGTG ATGGACTACA CACCCAAGCA CCTGGTGAGC ACGGTGTTCG GGTTTGGCAG CATGTGCGCG GCGATTGGCG GGATGTTCAT GACGCAAATC GTCGGCAGCG TGTTGACCGC TACCCACAAC AACTATGCCG TGCTGTTCAC CATGATCCCG GCCATGTACT TCCTGGCGCT GGTGTGGATG TACTTCATGG CACCGCGCAA GGTCGAGAGC GCCTGA
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Protein sequence | MNHSKITPAA PRMSQGSIGD KLRGAFGVGK TRWGMLALVF FATTLNYIDR AALGIMQPVL AKEMSWTAMD YANINFWFQV GYAIGFLLQG RLIDKVGVKR AFFFAVLLWS LATGAHGLAT SAAGFMVCRF ILGLTEAANY PACVKTVRLW FPAGERAIAT GLFNAGTNVG AMVTPALLPL ILAVWGWQAA FIAMGSLGLV WVVLWVLKYY NPEDHPSVRQ SEVQYIQQDD EPEPTRVPFS RILRLRGTWA FAVAYAITAP VFWFYLYWLP PFLNQQYSLG INVTQMGIPL IIIWLTADFG SIGGGILSSW LIGRGVRATT ARLVSMLIFA CTMLSVIFAA NASGLWVAVA AISLAVGAHQ AWTANIWSLV MDYTPKHLVS TVFGFGSMCA AIGGMFMTQI VGSVLTATHN NYAVLFTMIP AMYFLALVWM YFMAPRKVES A
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