Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_3237 |
Symbol | |
ID | 5871022 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | + |
Start bp | 3628145 |
End bp | 3629035 |
Gene Length | 891 bp |
Protein Length | 296 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 641548353 |
Product | hypothetical protein |
Protein accession | YP_001669465 |
Protein GI | 167034234 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.141519 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGACCA TCTGGCTATT CAATTCAACC ACAGACTCAG GGCACAAACC TGCAATTGGG GGGCAATTGG CAAACGTATC CGAAAATACA TTATGCCTGC GAAACCCATG GGTAACAGAT TCCGTTTTTA TGGGAAAGCT ATACTGCGCA ATGACGATCA CACTATTGAT TGGCATGTAC CCCTACCTCT CCCCACACAT CGCGGACCTA TACAATGAGG ATATGATATT AATGCTCTTG TTTTTAATAA CGCCCTTCGT GTTCACTCCT TTCCTAGCTT ATCGAATTTT CTTTATAAAG GGCTTATCTA CCATTTGCCT CAACCGATCA ACCCAAAAAA TCTACTACCA ACGCTTGAGC AAGGTATTGG TCTTTGAATG GAGCAATACC GGAGGCGGCC TTTTCAAACG CACCGAATTC GGCGGCTCCT CGTTCAGCAC CAGCTATGCC CTCGCCTTCG CCCCTCGCCG GGAAGACGGA ACCCTCCACC AAAAAGACTG CCTGTGGGTC GACAGCAACG AACCCACCGA ACCCGGTGTA AAGCACGTCG CCGAAGTCTG GGAATACCTC CGCCACTTCA TGGCCCACGG CCCAGACAAG CTCCCTCCGC CCGGCGAACC CAACTGGTGG CACAAGCCAC TGCACGCCAT CTGCCTAACC CCAGCGCAAG CCTGGCAACA CTATGCGCCT TGGCGAACCG GCGAGCCCGG TGAAATGCAG GGCAAAAAGA ACTGGCAATT ACCGTTCTGG GCCGTGCTGT TCCCCTACAA CCTCACGGTT GCCATCTGTT GGTACTTCAT CTGCAAGCTC TTCAACGTCC GCGCAGCCCC ACCGCCCCCA GCAGCCTTCG AAGAAACTCC AGCTCAACCC AAAAAAAGGA AGCGCAAATG A
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Protein sequence | MATIWLFNST TDSGHKPAIG GQLANVSENT LCLRNPWVTD SVFMGKLYCA MTITLLIGMY PYLSPHIADL YNEDMILMLL FLITPFVFTP FLAYRIFFIK GLSTICLNRS TQKIYYQRLS KVLVFEWSNT GGGLFKRTEF GGSSFSTSYA LAFAPRREDG TLHQKDCLWV DSNEPTEPGV KHVAEVWEYL RHFMAHGPDK LPPPGEPNWW HKPLHAICLT PAQAWQHYAP WRTGEPGEMQ GKKNWQLPFW AVLFPYNLTV AICWYFICKL FNVRAAPPPP AAFEETPAQP KKRKRK
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