| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_3223 |
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| Symbol | |
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| ID | 5871008 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 3611588 |
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| End bp | 3612325 |
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| Gene Length | 738 bp |
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| Protein Length | 245 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 641548339 |
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| Product | hypothetical protein |
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| Protein accession | YP_001669451 |
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| Protein GI | 167034220 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR03360] type VI secretion-associated protein, VC_A0118 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 48 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTGTGTAT ATGCGCATTT AAATGAGTTT GTAGGAAAGT TCGTGCGGTC ATGTAGGGCG
TTTATACTTT TGGAGAATGA ACTCAGGATG ATTAACCCTT GTGCATATGG CGCCGGTCTC
TCGTTGTTGT TTTTTCTGCA GCCGGTACTG GCAGGCCCCA CACGGGACTG TTCTCGGATT
GTGTCCAATG TCGAGCGACT GGCCTGTTTC GATCAGGCTG CCGGCACCCC GGCGTACAAG
ACACATCGGC AGTGGTCTGC ACCAGAGCAG CAGGCCCCTA CAGTGCTGCG CGTGATGGCA
AATGAAGCCG CACGGCCACG GGATGACCTG ACGTTTCGCA TCGAAAGGCG AGTCCAGGAC
GTTACAGGCG CACCAGAACT TGTGATCTCA GCACCCGCCA TAGCCTCGGG TAACGAACCT
GCCTACCTGG CGATCAGTTG CATTCAGGCC ATCTCCAGGT TGCAACTGAT TGCCAGACGC
CCCATCGAGC CGAGTTGGGT CAAGGTGCGG CTGGTGGGGG AGGGGTGGTC CACCACAGAA
ACGCAGTGGC AGGTGATGGA GAATGGTCAA GTGCTCGATG CGGGGCGCGG CCTGCCTGCG
ATCGAGCAGA TCAGAAGGCT CATTGGAGCC CAGCGCATCG AGGTTGTCAG TGATCACGAC
GAGGTCGACG GGCTGACCTT CGATGCACAA GGCCTCGACC CATTGATCAG CCAGGCGCGA
AGCTTATGCC GGTGGTAG
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| Protein sequence | MCVYAHLNEF VGKFVRSCRA FILLENELRM INPCAYGAGL SLLFFLQPVL AGPTRDCSRI
VSNVERLACF DQAAGTPAYK THRQWSAPEQ QAPTVLRVMA NEAARPRDDL TFRIERRVQD
VTGAPELVIS APAIASGNEP AYLAISCIQA ISRLQLIARR PIEPSWVKVR LVGEGWSTTE
TQWQVMENGQ VLDAGRGLPA IEQIRRLIGA QRIEVVSDHD EVDGLTFDAQ GLDPLISQAR
SLCRW
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