Gene PputGB1_3212 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_3212 
Symbol 
ID5870997 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp3596629 
End bp3597873 
Gene Length1245 bp 
Protein Length414 aa 
Translation table11 
GC content62% 
IMG OID641548328 
Productouter membrane porin 
Protein accessionYP_001669440 
Protein GI167034209 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.341701 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones53 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCATCA ACCCACTCGG TGTCACCGCC CTTTTGCTGG CATCCGCCAG CCCCTTGTTG 
CAGGCCAGCG AGCAATCCGA ATCGGCAGGC TTCATCGAAG GCAGCAAGCT GTCGATCAAG
GCACGCAACA TGTACATGCA GCGTGATAAC CGCGCCAGCG GCGCCCGGCA GAACTACGGC
GAGGAATGGG CCCAGGGTTT CATCGGCACC TTTCAGTCCG GCTTCACTCA AGGCACGCTG
GGTTTCGGTA TCGACCTGAT CGGCCAGTAC GCCTTCAAGC TCGACACCGG CGATGGCCGC
ACCGGTGGCG GCACTGGTCT GCTAGAGCAA GACAGCCACG GCGCCAAGCA GGACATCGGC
AAGGCCGGTG CGGCGCTGAA AGTGCGTGCG TCCAACACCG TACTCAAATA CGGCACACAA
GTGATGGCGG TGCCGGTGCT GGCCACCTCC GACAGCCGCC TGCTGCCAGA GACCGTCGAC
GGTTTCTCGC TCACCAGCAA GGAAATCCGC AACCTGCAGT TGGATGCGGG CCACTTCACC
GGCCTGACCA ACCGCAACCA GTCGTCCCGC GACAGCGGGC GCATGACCGC AGTCGACTAC
ATTGGTGGGG TCTACAGCTT CAATGAGCGG CTTTCCAGCA GCCTGTACTA CGCCAAGACT
GCCGAGCACT TTCGTAAGTA CTACGTGAAC ACCCGCTACC TGTTGCCGCT GGGCGCCAGC
CAGTCACTGA AGCTGGATTT CAACGCCTAC GACACGCAAA GCATCGGTCA GGCCCGCAGT
GGCGACCTGG ACAACCGCAT CTGGAGCCTG GGCGGCACCT GGACGCTGGG CGCGCATGCC
TTCACCCTCG CCTACCAGAA GGTGTCCGGC ACCGGCGACT ACGTGTACGG GCCGGATGGC
AACGCGGTGT ACAACTTCGC CAACTCGGTG CAGTACTCGG ACTTCGACTA CGAGAACGAG
AAATCCTGGC AGGCCCGCTA TGACCTTAAC CTGGCCGCTT ACGGGGCACC GGGGCTGAGC
TTCATGACCC GCTACGTGAA AGGCACCGAC TTCAAGAACG GCAGTGGCGG CGACCTGGAT
GGCAAGGCCT GGGAACGCGA TGTCGAGTTG CGTTACGTGG TACAGGCTGG CGTGGCCAAG
GATCTGTCGT TTCGCGTGCG CCAGGCCAGC TACCGCAGCT CGGACCGCGG CGGGCAGATC
GATGAAGTAC GGGTAATCAC CGAGTATCCG CTCAACCTGT TCTGA
 
Protein sequence
MSINPLGVTA LLLASASPLL QASEQSESAG FIEGSKLSIK ARNMYMQRDN RASGARQNYG 
EEWAQGFIGT FQSGFTQGTL GFGIDLIGQY AFKLDTGDGR TGGGTGLLEQ DSHGAKQDIG
KAGAALKVRA SNTVLKYGTQ VMAVPVLATS DSRLLPETVD GFSLTSKEIR NLQLDAGHFT
GLTNRNQSSR DSGRMTAVDY IGGVYSFNER LSSSLYYAKT AEHFRKYYVN TRYLLPLGAS
QSLKLDFNAY DTQSIGQARS GDLDNRIWSL GGTWTLGAHA FTLAYQKVSG TGDYVYGPDG
NAVYNFANSV QYSDFDYENE KSWQARYDLN LAAYGAPGLS FMTRYVKGTD FKNGSGGDLD
GKAWERDVEL RYVVQAGVAK DLSFRVRQAS YRSSDRGGQI DEVRVITEYP LNLF