| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_3187 |
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| Symbol | |
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| ID | 5870972 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 3563106 |
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| End bp | 3564569 |
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| Gene Length | 1464 bp |
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| Protein Length | 487 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641548303 |
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| Product | transcriptional regulator |
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| Protein accession | YP_001669415 |
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| Protein GI | 167034184 |
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| COG category | [E] Amino acid transport and metabolism
[K] Transcription |
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| COG ID | [COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.685376 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 53 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCCGCGA TCAGCGAGGG CCGCCTGCGC CCTGGCACGC CGTTGCCGGG CACGCGGGAG
ATGGCGCAGT TGCTGAACGT CAACCGCAAG ACAGTGATCC TGGCCTACGA GGAGGCCGAA
ACCAAAGGCT GGCTGCAAAG CGTGCAGCGT CGGGGCACCT TCGTCAGCCA GCAGTTGGCG
CCTGGCACAC TGGTCGCGCC GAGTGCCGCC AGGCCGTTTG CCCTGGCGCT GCCCGTGGAG
CCCGCCGTTG CCTACTTCAA GGCGAACGAG CAGGCTGCGG CGCAGCAGGG GCGGCCAGGG
GCCTTGTTTT TCGACAACGG CGCCTGTGAT CACCGGCTGC TGCCGCAGGC TGTTTTGCAC
CGCTATTACC GCAATGCCTT GCGCAGCAGC TTCACCAGCA ACAGCGTGCG CCACGGCAGC
GATTGCAGCA GCCTTTACCT GCGCGCCGCC CTGGCCGACA TGCTGCGGCA CAATCGCAGC
CTGAACGTTG GCGCCGAGCA TATCTGCCTG ACCCAGGGGG TGCAGATGTC GCTGTCGCTA
GTAACCAGCG TGTTGCTCAA GCCAGGTGAC GTTGTGCTGG TCGAGCGCCT GAGCTATCCC
CCGGCGTGGG AGATTTTCCG TCAGCTGGGT GCCCGGCTGG TAACCGTGGA CCTGGACCAT
GAGGGTTGCC GTGTCGATCA GATCGATGCC CTGTGCCGGC AGCACAAGGT GCGAATGATG
TACATAACGC CCCATCACCA GTTCCCGACC ACGGTCAGCC TGCCCGCCGG GCGCCGGCAG
CAGTTGCTGG AGCTGGCGCG ACAGCATGAC TTCTGCGTGG TCGAGGAAGA CTACGACTAC
GAATACCACT TTTCTGGGCG GCCTTACCTG CCTTTGGCCA GCGACCGCCA GCAGCGCCAT
GTGATTTACA TCGGCACACT GTCCAAACCC CTGGGCAGCA CGTTCCGTTG CAGCTACATC
GTCGCACCGG TGGAGGTAAC AGCCGTGCTG GAGCGCAGGG CCACGCTTAC CCTGGGGCAG
GGCGATGCGG TGATGCAGCG GATGCTGGCG GACTTGATCA ATGATGGCGA ACTGAAGAAA
CACTTGCGCC GGGTCAACCG CGAGTACCGT CGGCGCCGCG AAACCTTGCT GGCGTGTTTG
CATGGCGCGT TCGGCGAACA GATCACCGTA CAGGAACCCG AAGGTGGGTT GGCGCTGTGG
GTGAAGTTCG CCGATGCGAT CAACGTGGAT CAGCTGGTCG ACAACGCGCT GGAGCTGGAC
CTGGTGGTGC GCAGTGGGCG GCAGTTTTCG CCGTTTGGCC ATGCCGAAAA TGCGTTGCGC
CTGGGGTTCG CTTCGCTGGA TGTGGGTGAG ATCCGGTTGG CTACCCAACG CCTGGCGGAC
GCCGCCAAAG CGATTGGCAA GGCGGCGCCC ACCGGTGACC GTGCGGCGTC TAAATGCGCC
GCCACACGTC GCCCTGCTCG CTGA
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| Protein sequence | MAAISEGRLR PGTPLPGTRE MAQLLNVNRK TVILAYEEAE TKGWLQSVQR RGTFVSQQLA
PGTLVAPSAA RPFALALPVE PAVAYFKANE QAAAQQGRPG ALFFDNGACD HRLLPQAVLH
RYYRNALRSS FTSNSVRHGS DCSSLYLRAA LADMLRHNRS LNVGAEHICL TQGVQMSLSL
VTSVLLKPGD VVLVERLSYP PAWEIFRQLG ARLVTVDLDH EGCRVDQIDA LCRQHKVRMM
YITPHHQFPT TVSLPAGRRQ QLLELARQHD FCVVEEDYDY EYHFSGRPYL PLASDRQQRH
VIYIGTLSKP LGSTFRCSYI VAPVEVTAVL ERRATLTLGQ GDAVMQRMLA DLINDGELKK
HLRRVNREYR RRRETLLACL HGAFGEQITV QEPEGGLALW VKFADAINVD QLVDNALELD
LVVRSGRQFS PFGHAENALR LGFASLDVGE IRLATQRLAD AAKAIGKAAP TGDRAASKCA
ATRRPAR
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