| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_3182 |
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| Symbol | |
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| ID | 5870967 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 3554296 |
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| End bp | 3555537 |
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| Gene Length | 1242 bp |
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| Protein Length | 413 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641548298 |
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| Product | major facilitator transporter |
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| Protein accession | YP_001669410 |
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| Protein GI | 167034179 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 49 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAACCGA ACCCCATGCC AAGCAACCGC CAGGCCTCTC GTGGCCTTCC CGAACATAAT
CAACAGAGTG TCACGCAGCA GTGGCTGGCC ATCCTCTCGG TCGCCGTGGG CGCCTTCGCC
CTGGTCACCA GTGAGTTCCT CCCGGTGGGG GTACTCAACG ATGTCGCCAG CGACCTTGGC
ATCAGTGCCG GCCTTGCCGG CCTGATGGTG ACCCTGCCCG GTATCATGGC CGCGCTGGCC
GCGCCTTTGA TCTCGGTGGG TGTGGGGGCG CTGGACCGGC GCTACCTGCT GATCGGCCTG
ACACTGATCA TGATCATCGC CAACGCCATC GTGGCCTACG CCGGTGACTT CAACCTGCTG
TTGGTCGGCC GCGTGCTGCT GGGTGTCAGT ATTGGCGGCT TCTGGGCGAC CGCCATCGCC
CTCAGCGGGC GGCTGGCACC TGACGGCATG GGCGTAGCCA AGGCCAACTC CATCATCATG
GCGGGGGTAA CCCTGGCGAC GGTAGTGGGC GTACCCGTGG GCACCTGGCT GAGTGGCCTG
ATGGGCTGGC GCATGACCTT CCTGGTCACC GCCCTGGTCG GCGTACCCGT GCTGCTGGCG
CAGGTATTGC TGTTGCCACG GCTGATGCCG GAAAAGGCCA TTCGCATCAG CGACCTGCCA
GCGCTGTTCG TCAACCCGCA AGCACGGGTC GGCTTGATCG CTGTTTTGCT GATCGGCCTG
GCGCACTTTG CGGCGTACAC CTATGTTGCA CCGTTCTTCA AACAGAATGC CGGCTTCGAC
GGGCCGACCA TCGGCTCGTT GCTATTGCTG TACGGCGTGG CCGGTTTCAT GGGCAACATC
TTCGCCGGCT TTGCCGCCAA CCGCAGCGTG CGACATACCC TGATGCTGGT CGCGCTCATG
ATCGCAGTCA GTACCGCCCT GTTCCCGCAC TTCGCCACCA GCATGACGGG CGCCGCGATG
CTGATCGCAC TGTGGGGCTT TGCTTTCGGT GCGTTCCCGG CCTGCGCCAA TATCTGGATG
TTCGTGGTGG CGCCCAAGGA TGTCGAACGC GGCATGCCGC TGTTCGTGGC CATGTTCCAG
GTGATCATTG CCGTGGGCTC GTTCTTCGGC GGGCAAGTGG TCGACCATAT GGGCACCGCA
GTGCTGTTGA GCCTGGCCAC GGCGCTGGTG GGCTGTGGCT TCGTCACCGT GCTGGTGCTG
GGACGCAACG TCAGCAATAG CCTGGCGACG CAGCCAGGCT GA
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| Protein sequence | MEPNPMPSNR QASRGLPEHN QQSVTQQWLA ILSVAVGAFA LVTSEFLPVG VLNDVASDLG
ISAGLAGLMV TLPGIMAALA APLISVGVGA LDRRYLLIGL TLIMIIANAI VAYAGDFNLL
LVGRVLLGVS IGGFWATAIA LSGRLAPDGM GVAKANSIIM AGVTLATVVG VPVGTWLSGL
MGWRMTFLVT ALVGVPVLLA QVLLLPRLMP EKAIRISDLP ALFVNPQARV GLIAVLLIGL
AHFAAYTYVA PFFKQNAGFD GPTIGSLLLL YGVAGFMGNI FAGFAANRSV RHTLMLVALM
IAVSTALFPH FATSMTGAAM LIALWGFAFG AFPACANIWM FVVAPKDVER GMPLFVAMFQ
VIIAVGSFFG GQVVDHMGTA VLLSLATALV GCGFVTVLVL GRNVSNSLAT QPG
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