Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_3181 |
Symbol | |
ID | 5870966 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | + |
Start bp | 3553309 |
End bp | 3554154 |
Gene Length | 846 bp |
Protein Length | 281 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 641548297 |
Product | hypothetical protein |
Protein accession | YP_001669409 |
Protein GI | 167034178 |
COG category | [R] General function prediction only |
COG ID | [COG5006] Predicted permease, DMT superfamily |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 0.547943 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 49 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGACGCAA AAACTGCTGG AACCTTCGCC CCTGTCGGGG CAGCCATCGC CGCGCTGGTC TCGGTGCAAA CCGGTGCTGC CTTGGCCAAA ACCTTGTTTC CATTGATCGG CCCCGAAGGC GTTGTCGCCC TGCGGCTGGG CTTGTCCGCC GTCATCTTGC TGGCGGTGCT GCGCCCTTGG CGCATCTGGG GCCAGGCCAA CATGCTTCAT TTGTTGGGTT ATGGCGTAAT GATGGGGCTG ATGAATATTC TGATTTACCG GGCATTCCTC TATATCCCGG TGGGCATCGC GGTGTCCATC GAGGTCATCG GCCCACTGGG CGCGGCCTTG CTGTCTTCCC GGCGGCGGAT CGACCTGCTG TGGATTGCCC TGTCGGTCGC CGGGCTTACC TTGCTGCCAT GGGGCACGGG CAGTCAGGGC CTCGACCCGC GCGGGGTGAT GTACGCGCTC GCGGCTGCAT TGGCCTGGGG GCTGTATGTG ATGCTTGGCA GCAAAGTGGC GGTTCACGGC AAACAGGCAG TCGGCACCGG GATGTTGTTT GCCGCGCTGC TGGGCGTACC ACTTGGTGTC AACCACGCCG GTGCCGAGTT GCTGGCGCCA TGGGTGCTTA TGGTCGGGTT GGGCGTAGCG CTGCTTTCCA GCACGGTGCC TTTCCTGCTC GACATGTATG CCATGCGGCA CTTGCCGCCC AGTATTTTTG GCGTGCTGCT CAGCGCTTCG CCCGCTGCGG GGGCGATAGC AGGCTGGTTG ATCCTCGGTG AAGTGCTGGC ACTGACCCAG TGGCTGGGCA TAACAGCCAT TGCCTTGGCC TGCGCAGGGG CGGCACTGGT AGGGCGTGGT CGCTGA
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Protein sequence | MDAKTAGTFA PVGAAIAALV SVQTGAALAK TLFPLIGPEG VVALRLGLSA VILLAVLRPW RIWGQANMLH LLGYGVMMGL MNILIYRAFL YIPVGIAVSI EVIGPLGAAL LSSRRRIDLL WIALSVAGLT LLPWGTGSQG LDPRGVMYAL AAALAWGLYV MLGSKVAVHG KQAVGTGMLF AALLGVPLGV NHAGAELLAP WVLMVGLGVA LLSSTVPFLL DMYAMRHLPP SIFGVLLSAS PAAGAIAGWL ILGEVLALTQ WLGITAIALA CAGAALVGRG R
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