| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_3168 |
|---|
| Symbol | |
|---|
| ID | 5870953 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida GB-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010322 |
|---|
| Strand | - |
|---|
| Start bp | 3543440 |
|---|
| End bp | 3543904 |
|---|
| Gene Length | 465 bp |
|---|
| Protein Length | 154 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 641548284 |
|---|
| Product | AsnC family transcriptional regulator |
|---|
| Protein accession | YP_001669396 |
|---|
| Protein GI | 167034165 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1522] Transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 0.714414 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 45 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCAATCA AGCTCGATGC CATCGACCGC CGCATCCTGC GCGCGCTGCA GCGCGACGGC
AGGTTGCAGA ATCAGGAACT GGCCAAACAG GTGGGGTTGT CTGCTTCGCC GTGCCTGCGA
CGGGTGCGGC TGCTGGAGGA GGCTGGGGTG ATCGAGCGTT ATGTGGCATT GCTGGACCCG
GCCAAGGTCG CGCTGGGCCT GACCCTGTTC GTGCGCGTAT GGCTGAAGCG TCAGGACCAG
GACACCACCG ATGAGTTTGT CGAGGCCGTG CGCCAATTGC CCGAAGTGGT GGAGTGCCAT
GTGATGGCGG GCGACTGCGA CTTGTTGTTG CGGGTGGTGG CGGCTGACCT GGAAGCCTAT
CGGCGCTTTC AGATCAAGCA CCTGACCAGC CTGAGCGTGG TGCAGAACGT GAAGACCGAA
GTACCGATGG AAAAAATCAA GCTGACCACC GAGCTACCGG TGTAG
|
|---|
| Protein sequence | MPIKLDAIDR RILRALQRDG RLQNQELAKQ VGLSASPCLR RVRLLEEAGV IERYVALLDP
AKVALGLTLF VRVWLKRQDQ DTTDEFVEAV RQLPEVVECH VMAGDCDLLL RVVAADLEAY
RRFQIKHLTS LSVVQNVKTE VPMEKIKLTT ELPV
|
|---|
| |