| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_3136 |
|---|
| Symbol | |
|---|
| ID | 5870921 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida GB-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010322 |
|---|
| Strand | + |
|---|
| Start bp | 3512351 |
|---|
| End bp | 3513142 |
|---|
| Gene Length | 792 bp |
|---|
| Protein Length | 263 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 641548252 |
|---|
| Product | ABC-2 type transporter |
|---|
| Protein accession | YP_001669364 |
|---|
| Protein GI | 167034133 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG0842] ABC-type multidrug transport system, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 40 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 38 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACGCCT ACTGGCAATG TTTCAACGGC ATCATGCTGC GCGAATGGCT GCGCTTCGTG
TTGCAGCGCA CGCGCCTGCT CAGCGCCCTG GTGCGCCCAC TGCTGTGGTT GCTGGTGTTC
GCAGCCGGCT TTCGCGCGGC GCTGGGCATT GCCATCATCG AGCCTTACGA CACCTACATC
CCCTACGAGG TGTACATCAT TCCGGGCCTG GCCGGCATGA TTCTGTTGTT CAACGGCATG
CAGGGCTCAC TGTCGATGGT GTATGACCGC GAGATGGGCA GCATGCGCGT ATTGCTGACC
AGCCCGTTAC CCCGGCCGTT TCTGCTGGCC AGCAAGCTGT TGGCGACCTC GTTGATTTCC
CTGCTGCAAG TCTATGCCTT CCTCGCCATC GCCTGGCTGT ACGGCGTGCA GCCACCGGCT
GCGGGCTTGC TGCTGGCGTT GCCGGCCTTG TTGCTGGTGG CCTTCATGCT CAGCGCCCTG
GGGCTGTTGC TGTCGAACGC GATTCGCCAA CTGGAGAACT TTGCCGGGGT GATGAATTTC
GTGATTTTCC CGCTGTTTTT CCTGTCTTCA GCGTTGTATC CGCTGTGGAA GATGCGCGAG
GCCAGCCAGT GGCTGTATTG GCTGTGCGCT GTGAACCCGT TCAGCCATGC CGTGGAGCTG
GTGCGGTATG CGCTCTATGA GCGCCTGAAC CTGCTGGCAC TGGTGGTGTG CCTTGGGTTG
ACCGCATTGT TCACGCTGCT GGCGATACTC ACCTTCAACC CCCAGCATGC GGCGCTGCGC
AAGCCCCGCT GA
|
|---|
| Protein sequence | MNAYWQCFNG IMLREWLRFV LQRTRLLSAL VRPLLWLLVF AAGFRAALGI AIIEPYDTYI
PYEVYIIPGL AGMILLFNGM QGSLSMVYDR EMGSMRVLLT SPLPRPFLLA SKLLATSLIS
LLQVYAFLAI AWLYGVQPPA AGLLLALPAL LLVAFMLSAL GLLLSNAIRQ LENFAGVMNF
VIFPLFFLSS ALYPLWKMRE ASQWLYWLCA VNPFSHAVEL VRYALYERLN LLALVVCLGL
TALFTLLAIL TFNPQHAALR KPR
|
|---|
| |