| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_3098 |
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| Symbol | |
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| ID | 5870883 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 3464055 |
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| End bp | 3465479 |
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| Gene Length | 1425 bp |
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| Protein Length | 474 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 641548214 |
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| Product | D-alanine/D-serine/glycine permease |
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| Protein accession | YP_001669326 |
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| Protein GI | 167034095 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1113] Gamma-aminobutyrate permease and related permeases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 40 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATAACT TGCCGCACGG TCACTGCCCG CCTGAGGGCG ATACTCACGA ACTCAAGCGC
AACCTGTTCA ACCGCCATAT CCAGCTGATC GCCATCGGCG GTGCCATTGG CACCGGCCTG
TTCATGGGCT CTGGCAAGAC CATCAGCCTG GCTGGGCCTT CCATCATCTT TGTCTACATG
ATCATCGGCT TCATGCTGTT CTTCGTCATG CGGGCAATGG GCGAGCTGTT GCTGTCCAAC
TTGAATTACA AGTCGTTCAT CGATTTTTCC GCCGACCTGT TAGGGCCGTG GGCAGGCTTC
TTTACGGGCT GGACTTACTG GTTCTGCTGG ATCGTCACCG GTATTGCCGA CGTGATTGCG
ATCTCTGCCT ATACCCAATT CTGGTTCCCG GACATGCCGT TGTGGATACC GGCGCTGGCG
TGCGTTGGCC TGTTGCTCAC GCTGAACCTG ATGACGGTGA AGATGTTCGG GGAAATGGAG
TTTTGGTTTG CCATGATCAA GATCGTGGCT ATTTGCGCCC TGGTCTGCAC AGGCTTCTAT
ATGGTGGCGG CAGCGTACCA GTCGCCGGCC GGGCATGCGG CCGCGCTGGC CAACCTGTGG
AACGACGGGG GGATGTTCCC CCATGGTGCC ATGGGTTTCT TCGCTGGCTT CCAGATCGCC
GTGTTTGCCT TCGTCGGCAT CGAGCTGGTT GGCACAACAG CGGCCGAAAC CAAGAACCCT
GAGCGCAACC TGCCGCGGGC GATCAATTCG ATTCCGGTGC GTATCATCGT TTTCTACGTG
CTGGCGCTCA TCGCCATCAT GGCCGTGACC CCCTGGCGTG AAGTGGTGGC CAACAAGAGC
CCCTTTGTCG AGCTGTTCGT GCTGGCCGGT CTGCCTGCCG CCGCTGGCAT CATCAACTTT
GTGGTGCTGA CCTCGGCCAT GTCCTCGGCC AACAGCGGGG TGTTCTCCAC CAGCCGCATG
CTCTATGGCC TGGCGGTGGA TGGTGATGCG CCCGGCAAGT TCAGCGCACT GTCCAGCCGT
GCCGTGCCTT CCAATGGCCT GATCTTCTCC TGCGTGTGCC TGACCGGTGG GGCATTGGTC
ATCTACTTGG TGCCGAACAT GCTCGATGCC TTCACGCTCA TCACCACGGT GTCGGCCCTG
CTGTTCATGT TCGTCTGGTC GATCATCCTG CTGTCGTACT TGGCGTACCG CAAGCAGCGT
GACCCGTTGC ACCAAGCGTC GAAGTACAAG ATGCCGGGCG GCACCTTCAT GTGCCGGGTG
TGCCTGGCGT TCTTCGCCTT CATCCTGGCA TTGCTGGCCC TGGAAGCCGA TACCCGCATG
GCCTTGTACC TGGTACCGGT GTGGTTTGCC GTGCTGGGGC TGGCGTACCG CTCCATTCGG
CAGAAGAAAC AGGAGACCGC GCAGTTGTCG TTCGACGCCG ATTGA
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| Protein sequence | MNNLPHGHCP PEGDTHELKR NLFNRHIQLI AIGGAIGTGL FMGSGKTISL AGPSIIFVYM
IIGFMLFFVM RAMGELLLSN LNYKSFIDFS ADLLGPWAGF FTGWTYWFCW IVTGIADVIA
ISAYTQFWFP DMPLWIPALA CVGLLLTLNL MTVKMFGEME FWFAMIKIVA ICALVCTGFY
MVAAAYQSPA GHAAALANLW NDGGMFPHGA MGFFAGFQIA VFAFVGIELV GTTAAETKNP
ERNLPRAINS IPVRIIVFYV LALIAIMAVT PWREVVANKS PFVELFVLAG LPAAAGIINF
VVLTSAMSSA NSGVFSTSRM LYGLAVDGDA PGKFSALSSR AVPSNGLIFS CVCLTGGALV
IYLVPNMLDA FTLITTVSAL LFMFVWSIIL LSYLAYRKQR DPLHQASKYK MPGGTFMCRV
CLAFFAFILA LLALEADTRM ALYLVPVWFA VLGLAYRSIR QKKQETAQLS FDAD
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