Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_3087 |
Symbol | |
ID | 5870872 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | - |
Start bp | 3451711 |
End bp | 3452211 |
Gene Length | 501 bp |
Protein Length | 166 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 641548203 |
Product | redoxin domain-containing protein |
Protein accession | YP_001669315 |
Protein GI | 167034084 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0678] Peroxiredoxin |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 47 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 46 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGATCAAAA TTGGCGATCA ACTGCCCGAC GTTACCCTTT ACCAATACAA CACTGACGCA GGCGCCTGCG CGATCGGCCC GAATGCCTTT TCCATTCGCG AGCGTTGCAA GCAGAAAAAG GTACTGATCT TCGCATTGCC GGGCGCGTTC ACACCGACCT GTTCTGAACG TCATGTTCCC GGTTATGTCG CTGAAGCACC TGCGCTGTTC GCGGCTGGCA TCGACGAAAT TCTCTGTGTC TCGGTGAACG ATGCCTTTGT CATGAATGCC TGGGGCAATA GCCTGCAGGT GGGTGACGCG GTCAAGATGA TCGGCGATGG CAATGGCGAA TTCAGCGAGG CGCTGGGCCT GATCCAGGAC CTTTCGGCGC GCGGTATGGG GCGTCGCTCC CAGCGCTATG CCATGTTGGT CGACGACCTG GTGGTCAAGC ACATCGCGGT GGAAGCCCCC GGCAAGTTCG AAGTCAGTGA TGCCGCCAGC ATGCTGGCTG CGCTGCGCTA G
|
Protein sequence | MIKIGDQLPD VTLYQYNTDA GACAIGPNAF SIRERCKQKK VLIFALPGAF TPTCSERHVP GYVAEAPALF AAGIDEILCV SVNDAFVMNA WGNSLQVGDA VKMIGDGNGE FSEALGLIQD LSARGMGRRS QRYAMLVDDL VVKHIAVEAP GKFEVSDAAS MLAALR
|
| |