| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_3045 |
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| Symbol | |
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| ID | 5870830 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 3396145 |
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| End bp | 3397827 |
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| Gene Length | 1683 bp |
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| Protein Length | 560 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641548161 |
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| Product | YidE/YbjL duplication |
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| Protein accession | YP_001669273 |
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| Protein GI | 167034042 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2985] Predicted permease |
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| TIGRFAM ID | [TIGR01625] AspT/YidE/YbjL antiporter duplication domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 47 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTTGACC GGGTCATGGA TGCACTGCGA GACAATCCCG AAATCGCTGT ATTTCTCGCC
ATTGCCCTGG GCATCCTGCT CGGCCGTATC AAGCTGGGCA GTTTCCATCT GGGTTCTGTC
GCTGGCGCAC TGCTGATGGG GCTGCTGATT GGTCAGATCG GCCTGCAAGT GCCCCACGAA
CTGAAATCGG TATTCTTCGC CTTGTTCATC TATGCGGTCG GCTTCAAGAG TGGGCCGGAA
TTCTTCGGCA GCCTCAACCG CGGCACGTTC AAGCTGGTCA TTCTCTCGCT GGTGCTGTGC
GGCACTGCCC TGGCAGTGAT TCTGGCGATG AACGCGCTGT ACGGCTTCGA TGCAGGCTTT
ACCGCAGGCC TGGGCGCCGG CGCCCTGACG GACACGGCGA TCATGGGCAC GGCCAGCAGC
GCGATCGCCC AATTACCGCT GGACGCGGCA GCCAAGGCCG AGCTCAACAG CCACATGGCT
GTAGCCTATG CGATCACCTA TGTATTCGGC ACCGTCGGGC TGATCGTCTT CGTCGGCAGC
CTGGCGCCAC GCCTGCTCGG GGTGGACTTG CGCAGCAGCG CCCAGGCGCT GGAGCGTGAA
CTGGGCATTG AACGCAATGA AGACGCCATC AGCATCCCTT ATACCCGCAT CGTCGTGCGC
GCCCATCGGC TCACGGCCGC CCATGCAGCC GGCACAACCA TCGCCGATGT GGAGGCGCTG
CACCCGGCGC TGAGCATCGA ACGCGTCACC CGCGCCGGGC AACACCTGGA GCGCGACCCG
GCATTGCGCC TTGAACGTGA CGACATCCTG GGCATATACG CCCTGCGCGA TGCTGTGAGC
GATCTGCACG GCTGGATAGG CCCGGAAGTG GATCACCCGC AAAGCCTGTC GTTCGCCACC
CGCAGCGCCG ACATCGTGCT GACCAGCCGC CACCTGGCCG GTCGCAGCCT GCATCAGGTG
AAGGCCGCAC TTACCGGTTC CGAGCGCATG GGTTGCTTTC TCACGGGCAT CACCCGTCAA
GGCCTGCCCC TGCCCCTTTT GCCGGAAACC ATTCTGCGTC GGGGCGATGT CATCAGCCTT
ACTGGGCGAG CCAGCAGTGT TGACGCATTG GCCGCGCAAC TGGGCCGGAT CCGACACGCC
AGCTACCGCA GCGATATCGC CATCCATGCG CTGGGCCTGG TTGCCGGTTC ACTGGTGGGG
CTGCTGTCTA CTCACATCGG CATGATTCCA GTGGAACTCG GCATCGGCGG TGGCGTGTTG
CTAGCCGGGC TGTTGATCGG TTGGTACAAC TCGCGACATC CCGATCTCGG CGCCCTGCCA
CCTGCCGCAC AGTGGGCGTT TTCCGAGTTT GGCCTGACCG CCTTCGGCGC GGTCGTGGGC
TTGCTGGCCG GGCCGGCGGC GCTGACGGCG GTCAGGGAAC AAGGCATGGC ACTGTTGCTG
GCAGGCGCAC TGGTGACCCT CATTCCGCCG CTGGTCACAC TCTACGTTGG CCGCTACGTG
CTGCGCTTGC ATCCGATGAT CCTGTTGGGC GCGCTGGCCG GAGCACAGAC CGAAGCGGCC
TCGATGAACA AGATCATCGA GCAGTCGGGA AGCAATACCC CAGTCATCGG TTTCACCGTC
TGCTATGCCG TCTCCAATGT GCTGCTCGCA GTATGTGGCC CGATCATCAT CGCCTTTGCC
TGA
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| Protein sequence | MLDRVMDALR DNPEIAVFLA IALGILLGRI KLGSFHLGSV AGALLMGLLI GQIGLQVPHE
LKSVFFALFI YAVGFKSGPE FFGSLNRGTF KLVILSLVLC GTALAVILAM NALYGFDAGF
TAGLGAGALT DTAIMGTASS AIAQLPLDAA AKAELNSHMA VAYAITYVFG TVGLIVFVGS
LAPRLLGVDL RSSAQALERE LGIERNEDAI SIPYTRIVVR AHRLTAAHAA GTTIADVEAL
HPALSIERVT RAGQHLERDP ALRLERDDIL GIYALRDAVS DLHGWIGPEV DHPQSLSFAT
RSADIVLTSR HLAGRSLHQV KAALTGSERM GCFLTGITRQ GLPLPLLPET ILRRGDVISL
TGRASSVDAL AAQLGRIRHA SYRSDIAIHA LGLVAGSLVG LLSTHIGMIP VELGIGGGVL
LAGLLIGWYN SRHPDLGALP PAAQWAFSEF GLTAFGAVVG LLAGPAALTA VREQGMALLL
AGALVTLIPP LVTLYVGRYV LRLHPMILLG ALAGAQTEAA SMNKIIEQSG SNTPVIGFTV
CYAVSNVLLA VCGPIIIAFA
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