| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_3043 |
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| Symbol | |
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| ID | 5870828 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 3391540 |
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| End bp | 3394686 |
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| Gene Length | 3147 bp |
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| Protein Length | 1048 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641548159 |
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| Product | CzcA family heavy metal efflux protein |
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| Protein accession | YP_001669271 |
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| Protein GI | 167034040 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG3696] Putative silver efflux pump |
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| TIGRFAM ID | [TIGR00914] heavy metal efflux pump (cobalt-zinc-cadmium) |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTGCGC AACTGATACG CTGGTCGGTG GGCAACCGGG TGCTGGTTCT GTTCGCCACG
TTGTTTTTGG TGGCCTGGGG CGTGCTCTCG GTGCGTAGCC TGCCAATCGA CGCGTTGCCG
GACTTGTCGG ACGTGCAAGT CATCATTCGC ACCTCCTACC CTGGGCAAGC GCCACAGATT
GTGGAAAACC AGGTGACCTA CCCACTGACC ACCACCATGC TCTCAGTGCC TGGCGCCAAG
ACAGTGCGCG GCTTCTCGGC CTTTGGCGAC AGCTTCGTCT ACGTGTTGTT CGAGGATGGC
ACCGACCTCT ACTGGGCACG CTCGCGGGTC CTGGAGTATC TGAGCCAGGT GCAATCGCGC
CTGCCTGCGT CGGCCAAACC CATACTCGGG CCAGATGCCA CAGGTGTGGG CTGGATTTAT
CAATACGCGC TGGTCGACCG CCGTGGTGGT CATGACCTGG CGCAACTGCG CAGCCTGCAG
GATTGGTTCT TGCGCTTCGA GCTCAAGACC CTGCCTGATG TCGCCGAAGT GGCGAGTATC
GGCGGCATGG TCAAGCAGTA CCAAGTGGTG CTCGACCCGT TGCGCCTGGC CACGCTTGGC
ATTACCCAAG CGCAGGTGAC GGATGCCATC GCCAAGGCCA ACCAGGAAAC CGGCGGGGGT
GTCCTTGAGC AAGGTGAGGC GCAATTCATG GTTCGTGCTT CGGGTTACCT GAAGACACTC
GATGATTTGC GCGCCATCCC CCTGCGTCTG GCCACCAATG GCGCACCAGT AACGCTTGGC
GATGTCGCCA CCGTACAGCT TGGGCCAGAG GCGCGCAGAG GGATTGGTGA ACTGGATGGC
CAGGGCGAGG CCGTGGGTGG TGTGGTCATT TTGCGCAGTG GCAAAAACGC AAGGGAAGCC
ATTGCCCGCG TCAAGGAAAA ACTCGAAGCG TTGAAGAAGG GCCTGCCCGC CGGGGTGGAG
CTGGTCACCA CCTATGATCG CAGCCAATTG ATCGACCGCG CCGTGGACAA CCTGAGCCAA
AAACTGCTCG AAGAGTTCAT CGTGGTCGCA CTGGTGTGCG CGGCGTTTCT CTGGCACCTG
CGTTCATCAC TGGTGGCGAT CGTCTCCCTG CCAGTGGGGG TGCTGATTGC ACTGATCGTC
ATGCGCCATC AGGGGATGAA CGCCAACATC ATGTCACTTG GCGGCATCGC TATCGCTATC
GGTGCAATGG TCGACGCGGC AGTGGTAATG ATCGAAAACG CACACAAGCA TGTCGAGGCC
TGGCATGCCC GCAACCCGGG GGGCCAGCTG CAGGGCGAAC AACACTGGAA GGTCATGACC
GAGGCGGCAG TCGAGGTGGG GCCGGCCCTG TTCTTCAGCC TGATGATCAT CACACTGTCG
TTCGTTCCGG TCTTTACCTT GCAGGCCCAG GAAGGACGGT TGTTCGCACC GTTGGCGTTC
ACCAAGACCT ACGCCATGGC TGCTGCCGCA GGGCTGGCGG TGACGCTGGT ACCGGTGCTG
ATGGGCTACT GGATTCGCGG CCCGCTGCCA GCGGAGGCGC GCAACCCGCT TAACCGCGGG
CTGATTCGGC TGTATCGCCC CGCGCTGGAG GTTGTGTTAC GCCGACCACG CATGACGCTG
ATGGGCGCAC TGCTGATCCT CCTCAGCAGC CTGTGGCCAT TGAACCATTT AGGCGGGGAG
TTTCTACCGC CGTTGGACGA GGGCGACCTG CTGTACATGC CCTCTGCGCT TCCTGGGTTA
TCCACCCAAA AAGCTTCACA GTTGCTGCAC CGCACCGACC AGCTGATTCG GACCGTGCCC
GAGGTGGCCA GCGTATTTGG CAAAGCCGGG CGCGCCGAAT CGGCGACCGA CCCCGCGCCG
CTGGAGATGT TCGAAACCAT CGTGCGCCTG AAGCCGAAAG ACCAGTGGCG ACCGGGTATG
ACCAGCGAGA AGCTGATTGA AGAGCTCGAC CGGACAGTTC AGGTACCAGG GCTGACCAAC
ATCTGGATTC CGCCCATTCG AAACCGGATC GACATGTTAG CTACCGGCAT CAAGAGCCCC
ATTGGCGTGA AAGTGGCTGG CAGCGACCCC GGGCTGATCG ATCGCGTGAC ACTGGCCGTC
GAGCGGGCAG CGAAAACGGT GCCCGGCGTG ACCTCGGCAT TGGCTGAGCG CTTGACTGGC
GGGCGCTACA TCGACCTCGA TATCGACCGT CAGGCGGCAG CGCGCCACGG CCTGAACATC
GCAGACGTGC AAGCCATTGT TGCCGGAGCC ATCGGTGGTG AAACCATTGG CGAAACGGTT
GAAGGGTTGG CGCGCTATCC CATCAGCGTA AGGTACCCAC GGGAATGGCG AGACTCCGCC
GATGCACTGC GTCAGTTGCC GATCTACACA GCCCAGGGCG GGCAGATCAC CCTTGGTACC
GTCGCACAGG TGCGCATCAC CGATGGTCCA CCGATGCTCA AGAGCGAGAA CGCCCGCCCT
TCGGGCTGGG TTTACATCGA CGTACGCGGT CGTGATCTGT CGTCCGTGGT GGCCGACCTG
CGCCAAGTGG TAGAGCGCGA GGTGAAGCTT GAACCCGGCA TGAGCCTCAG CTACTCCGGC
CAGTTCGAAT ATCTGGAGCG TGCCAATGCT CGCCTGACGT GGGTGGTACC GGCAACGCTG
GCGATCATTT TCGTTCTGCT TTACCTCACC TTCGGCCGTA TGGAAGAAGC GCTGCTGATC
ATGGGTACCT TGCCCTTCGC CCTCACCGGT GGTGTGTGGT TGCTTTATCT GATGGGTTTC
AACCTGTCGG TGGCCACGGG TGTCGGCTTC ATCGCCTTGG CAGGGGTGGC CGCGGAGTTC
GGCGTCATCA TGCTGCTCTA CCTGAACAAC GCCTGGGCCG AGCGCCTAGC CAAAGGCGAG
CACACGCAAG CAGCGCTGCT GGACGCGATT GGCGAGGGTG CCGTGCATCG TATTCGCCCC
AAAGCCATGA CCGTGGCGGT AATTGTCGCA GGGCTGCTGC CGATTCTCTG GAGCGACGGC
ACCGGCAGCG AAGTGATGGC GCGAATCGCT GTACCGATGG TGGGCGGCAT GCTGACTGCA
CCCTTGCTCT CGCTGTTCGT CATCCCCGCA GCGTACTGGA TGATCCGACG CCGACAGGTT
GACGGCTTGA AGGTAGGGGC AAGGTGA
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| Protein sequence | MIAQLIRWSV GNRVLVLFAT LFLVAWGVLS VRSLPIDALP DLSDVQVIIR TSYPGQAPQI
VENQVTYPLT TTMLSVPGAK TVRGFSAFGD SFVYVLFEDG TDLYWARSRV LEYLSQVQSR
LPASAKPILG PDATGVGWIY QYALVDRRGG HDLAQLRSLQ DWFLRFELKT LPDVAEVASI
GGMVKQYQVV LDPLRLATLG ITQAQVTDAI AKANQETGGG VLEQGEAQFM VRASGYLKTL
DDLRAIPLRL ATNGAPVTLG DVATVQLGPE ARRGIGELDG QGEAVGGVVI LRSGKNAREA
IARVKEKLEA LKKGLPAGVE LVTTYDRSQL IDRAVDNLSQ KLLEEFIVVA LVCAAFLWHL
RSSLVAIVSL PVGVLIALIV MRHQGMNANI MSLGGIAIAI GAMVDAAVVM IENAHKHVEA
WHARNPGGQL QGEQHWKVMT EAAVEVGPAL FFSLMIITLS FVPVFTLQAQ EGRLFAPLAF
TKTYAMAAAA GLAVTLVPVL MGYWIRGPLP AEARNPLNRG LIRLYRPALE VVLRRPRMTL
MGALLILLSS LWPLNHLGGE FLPPLDEGDL LYMPSALPGL STQKASQLLH RTDQLIRTVP
EVASVFGKAG RAESATDPAP LEMFETIVRL KPKDQWRPGM TSEKLIEELD RTVQVPGLTN
IWIPPIRNRI DMLATGIKSP IGVKVAGSDP GLIDRVTLAV ERAAKTVPGV TSALAERLTG
GRYIDLDIDR QAAARHGLNI ADVQAIVAGA IGGETIGETV EGLARYPISV RYPREWRDSA
DALRQLPIYT AQGGQITLGT VAQVRITDGP PMLKSENARP SGWVYIDVRG RDLSSVVADL
RQVVEREVKL EPGMSLSYSG QFEYLERANA RLTWVVPATL AIIFVLLYLT FGRMEEALLI
MGTLPFALTG GVWLLYLMGF NLSVATGVGF IALAGVAAEF GVIMLLYLNN AWAERLAKGE
HTQAALLDAI GEGAVHRIRP KAMTVAVIVA GLLPILWSDG TGSEVMARIA VPMVGGMLTA
PLLSLFVIPA AYWMIRRRQV DGLKVGAR
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