Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_3027 |
Symbol | |
ID | 5870812 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | + |
Start bp | 3374633 |
End bp | 3374992 |
Gene Length | 360 bp |
Protein Length | 119 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 641548143 |
Product | protein of unknown function DUF861 cupin_3 |
Protein accession | YP_001669255 |
Protein GI | 167034024 |
COG category | [R] General function prediction only |
COG ID | [COG3450] Predicted enzyme of the cupin superfamily |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 45 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 0.620994 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACAAGA AACTGACCGT GTTCCGCGAA CTGGATATCC AACCGGTGCG CGACCTGCCT TTTTTTGAAG AGGTCGTGGA AGGCACCCCT CATACGCTGA CGTCCAAGTA CTATCACGAT GAACAGCAAG GTCGCATTTC TGGAGAATGG GAAGCCAGCA CCGGAGCGTG GCGCATCGAC TACAAAGTTT GGGAGTTCTG CCATGTCCTG AGTGGATGCT GCGTCATTGA ACTTGAAGGT TGCGCCCCCC TCACACTGGC CGCTGGGGAC ACGTTCATTA TCGAGCCGGG CGCCAAGGGG AAATGGACCG TGCTGGAAGA CATGAAAAAG AACTTCGTGA TCCTCTTGCC CACGAACTAG
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Protein sequence | MNKKLTVFRE LDIQPVRDLP FFEEVVEGTP HTLTSKYYHD EQQGRISGEW EASTGAWRID YKVWEFCHVL SGCCVIELEG CAPLTLAAGD TFIIEPGAKG KWTVLEDMKK NFVILLPTN
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