Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_2932 |
Symbol | |
ID | 5870718 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | - |
Start bp | 3282497 |
End bp | 3283171 |
Gene Length | 675 bp |
Protein Length | 224 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641548050 |
Product | urease accessory protein UreF |
Protein accession | YP_001669162 |
Protein GI | 167033931 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0830] Urease accessory protein UreF |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 0.617644 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 45 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACAGCG ACCTGGCGTT GCTGCGCCTG CTGCAGCTGG CCAGCCCCGG CTTGCCGGTG GGCGGCTTCA CCTACTCGCA AGGCCTGGAG TGGGCGGTCG AGGCCGGCTG GGTGCGTGGC GTGGACGGCT TCGTTGCCTG GCAACGCGAG CAGGTTCACG ACACCCTGGC TTGCCTCGAC TGGCCGGTTC TGGCGCGCTT GTACCACGCA TGCCAGGCCG AAGATGCCGC AGCGTTCGGC CATTGGAGCC GGTTCTTGCT GGCCAACCGT GAAACGGCCG AGCTGCGGCT GGAAGAACAG CAGCGCGGTG CGGCATTGGC GCGGTTGCTC GACGGCTGGC AATTGGGCCA GGCACCGGCC TGGCGCGCCA GCCTTGAGTT AAGCCAGCTG GGCGGCATGG CCTGGCTGGC CGCGCACTGG GCCATCCCGC TGCGCCAATT GGCATTGGGC CATGGTTTTG CCTGGCTAGA GGGCGCGGTC ATGGCCGGGG TCAAGCTGGT GCCGTTCGGC CAGCAGGCTG CCCAGACCTT GCTGCGCGAC CTCGGCAACG AATTGCCCGC TGCGCTCGAC CAGGCACTGG GCCTGGGCGA CGACCAGCTC GGCGGTGGCC TGCCACTGCT GGCCATTGCT TCATCGCGTC ACGAAACCCA ATACACCCGT TTGTTCCGTT CCTGA
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Protein sequence | MNSDLALLRL LQLASPGLPV GGFTYSQGLE WAVEAGWVRG VDGFVAWQRE QVHDTLACLD WPVLARLYHA CQAEDAAAFG HWSRFLLANR ETAELRLEEQ QRGAALARLL DGWQLGQAPA WRASLELSQL GGMAWLAAHW AIPLRQLALG HGFAWLEGAV MAGVKLVPFG QQAAQTLLRD LGNELPAALD QALGLGDDQL GGGLPLLAIA SSRHETQYTR LFRS
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