Gene PputGB1_2932 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_2932 
Symbol 
ID5870718 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp3282497 
End bp3283171 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content68% 
IMG OID641548050 
Producturease accessory protein UreF 
Protein accessionYP_001669162 
Protein GI167033931 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0830] Urease accessory protein UreF 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value0.617644 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACAGCG ACCTGGCGTT GCTGCGCCTG CTGCAGCTGG CCAGCCCCGG CTTGCCGGTG 
GGCGGCTTCA CCTACTCGCA AGGCCTGGAG TGGGCGGTCG AGGCCGGCTG GGTGCGTGGC
GTGGACGGCT TCGTTGCCTG GCAACGCGAG CAGGTTCACG ACACCCTGGC TTGCCTCGAC
TGGCCGGTTC TGGCGCGCTT GTACCACGCA TGCCAGGCCG AAGATGCCGC AGCGTTCGGC
CATTGGAGCC GGTTCTTGCT GGCCAACCGT GAAACGGCCG AGCTGCGGCT GGAAGAACAG
CAGCGCGGTG CGGCATTGGC GCGGTTGCTC GACGGCTGGC AATTGGGCCA GGCACCGGCC
TGGCGCGCCA GCCTTGAGTT AAGCCAGCTG GGCGGCATGG CCTGGCTGGC CGCGCACTGG
GCCATCCCGC TGCGCCAATT GGCATTGGGC CATGGTTTTG CCTGGCTAGA GGGCGCGGTC
ATGGCCGGGG TCAAGCTGGT GCCGTTCGGC CAGCAGGCTG CCCAGACCTT GCTGCGCGAC
CTCGGCAACG AATTGCCCGC TGCGCTCGAC CAGGCACTGG GCCTGGGCGA CGACCAGCTC
GGCGGTGGCC TGCCACTGCT GGCCATTGCT TCATCGCGTC ACGAAACCCA ATACACCCGT
TTGTTCCGTT CCTGA
 
Protein sequence
MNSDLALLRL LQLASPGLPV GGFTYSQGLE WAVEAGWVRG VDGFVAWQRE QVHDTLACLD 
WPVLARLYHA CQAEDAAAFG HWSRFLLANR ETAELRLEEQ QRGAALARLL DGWQLGQAPA
WRASLELSQL GGMAWLAAHW AIPLRQLALG HGFAWLEGAV MAGVKLVPFG QQAAQTLLRD
LGNELPAALD QALGLGDDQL GGGLPLLAIA SSRHETQYTR LFRS