Gene PputGB1_2912 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_2912 
Symbol 
ID5870698 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp3262523 
End bp3264475 
Gene Length1953 bp 
Protein Length650 aa 
Translation table11 
GC content66% 
IMG OID641548030 
ProductNADH:flavin oxidoreductase/NADH oxidase 
Protein accessionYP_001669142 
Protein GI167033911 
COG category[C] Energy production and conversion 
COG ID[COG1902] NADH:flavin oxidoreductases, Old Yellow Enzyme family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAACCG CCTTCCCTCA CCTGTTCGAA GCCTTGCAGA TCCGCGGCAA ACGCTTGAAG 
AACCGCATCA TGTCAACCGG GCACGACACC TGCCTGCCCA CCGACAACCT GGTCAACGAC
AAGCTGATCG CCTACCAGCG GGACCGTGCT GCCGGTGGCG TCGGCCTGAT CGTGCTGCAG
GTCGCCGGGG TGCACGACAG TGCCCGCTAC ACCTCACACG TACTGATGGC CACCGACGAT
GCGTGCATTG ATGGCTACCG CCAGCTCGCC GAGGCTTGTC ATGCGCACGG CACCGTGGTG
CTGTCGCAGC TGTTCCACCC CGGGCGGGAG ATCATGGAGT CGGCGGACGG CCTGCTGGCG
GTGGCCTACT CGGCCTCAGC AGTGCCCAAT GAGCGCTTCC GGGTAATGCC GCGCGCGTTG
GACCAGGCGA TGATCGACGA AATCGTCCAG GGCTATGCCA GCGCCGCCCG CCGCCTGCAC
CAGGCCGGGC TGGATGGCGT CGAGGTGGTC GCCAGCCATG GCTATCTGCC CGCGCAGTTC
CTCAACCCGC GGGTGAACCT GCGCAGCGAT GGCTACAACG GCGAACTGGC GCAGCGCTTG
AGGTTCTTGC GCGAAGTGCT GGCCGCTGTG CGCGCCGCCA CCGACGAACA TTTCATCATC
GGCCTGCGCA TCAGCGCTGA CGAGCGCGAC ACCCAGGGCC TGAGCGAAGA CGAGTCACTG
GCGGCCGCCG TGGCCTTGCA GGGCCAGCTC GATTACCTGC ATATCGTCGC CGGCACCTCG
GCATCGCTGG GCGGCGCCGT GCATATCGTG CCGCCGATGG CGATCGAGGC GGCTTACTTG
GCCCGCGAGG CCGGCACCTT CAAGCAACAG CTCGATATAC CGCTGTTCGT CACCGGGCGC
ATCAACCAGC CCCAGGAAGC CGAGCTGATC CTGGCGCGCG GCCAGGCCGA TGTGTGCGGC
ATGACCCGAG CGTTGATTTG CGACCCGTTG ATGCCGAGCA AGACCGAACG CGGCCAGGTC
GAGGACGTAC GTGCCTGCAT CGCGTGCAAC CAGGCCTGTA TCGGCCATTT CCACCGTGGT
TTGGCCATTT CCTGCATTCA GCGTCCAGAA ACCGGTCGTG AGCTGCAATA CGGGCAACTT
ACGCCCGCCA TTTCGCCCAA GCGCATCATG GTCGCAGGTG GCGGGCCTGC CGGTATGAAG
GCCGCCGCCG TGGCCGCCGC GCGCGGGCAC CAGGTCACCC TGTACGAGGC CGGCCCGCAG
CTGGGTGGGC AGGTGTTGCT GGCCCAGCTG CTGCCACGGC GTAGCGAGTT CGGCGGTGCC
AGCACCAACC TGCAGCGGGA AATGGCCCTG GCCGGTGTAG AGGTAGTGCG CAATACCCGG
GTCGACCGCG CCCTGGTCGA ACGCGAGCGC CCGGACCTGG TCATCGCGGC AACCGGTGCC
ACCCCATACT GGCCGGCGTT CGAGCGTACC GGGGAGCTGC AGGTGGTGGA CGCCTGGCAA
GTCCTGCGCA ATGAAGTGAA GCTGGGGCGT TCGGTGCTGG TGGTCGACTG GCGCTGCGAC
TGGATCGGCC CCGGTATCGC CGAACGCCTA GTACGCGAGG GCCATCAGGT GCAATTGGCG
GTAAACGGCA CCCATTGCGG CGAAAGCCTG CCGCTTTATG TACGCGATCA ACTGGCCGGC
GAGCTGCATC GCCTGGGCAT CCCCATCACC CCTTATGCCC GCCTGTATGG CAGCGACGAC
AATACGGTGT ACCTGCAGCA CACCGCCAGC GGCGAACCAA TGATCTTCGA AGGCATCGAC
ACCCTGGTGC TGTGCCTGGG CCATCAACCG GAAGACCGCC TTGCCACTGA ACTGGCAGGC
CTGGTGGAGG TACGACGGAT TGGCGACTGC CTGGCGCCGC GCACGGCCGA AGAGGCCATT
CACGATGGCC TGACAGTTGC CTGGGCGCTC TGA
 
Protein sequence
MQTAFPHLFE ALQIRGKRLK NRIMSTGHDT CLPTDNLVND KLIAYQRDRA AGGVGLIVLQ 
VAGVHDSARY TSHVLMATDD ACIDGYRQLA EACHAHGTVV LSQLFHPGRE IMESADGLLA
VAYSASAVPN ERFRVMPRAL DQAMIDEIVQ GYASAARRLH QAGLDGVEVV ASHGYLPAQF
LNPRVNLRSD GYNGELAQRL RFLREVLAAV RAATDEHFII GLRISADERD TQGLSEDESL
AAAVALQGQL DYLHIVAGTS ASLGGAVHIV PPMAIEAAYL AREAGTFKQQ LDIPLFVTGR
INQPQEAELI LARGQADVCG MTRALICDPL MPSKTERGQV EDVRACIACN QACIGHFHRG
LAISCIQRPE TGRELQYGQL TPAISPKRIM VAGGGPAGMK AAAVAAARGH QVTLYEAGPQ
LGGQVLLAQL LPRRSEFGGA STNLQREMAL AGVEVVRNTR VDRALVERER PDLVIAATGA
TPYWPAFERT GELQVVDAWQ VLRNEVKLGR SVLVVDWRCD WIGPGIAERL VREGHQVQLA
VNGTHCGESL PLYVRDQLAG ELHRLGIPIT PYARLYGSDD NTVYLQHTAS GEPMIFEGID
TLVLCLGHQP EDRLATELAG LVEVRRIGDC LAPRTAEEAI HDGLTVAWAL