Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_2912 |
Symbol | |
ID | 5870698 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | + |
Start bp | 3262523 |
End bp | 3264475 |
Gene Length | 1953 bp |
Protein Length | 650 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641548030 |
Product | NADH:flavin oxidoreductase/NADH oxidase |
Protein accession | YP_001669142 |
Protein GI | 167033911 |
COG category | [C] Energy production and conversion |
COG ID | [COG1902] NADH:flavin oxidoreductases, Old Yellow Enzyme family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 41 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAAACCG CCTTCCCTCA CCTGTTCGAA GCCTTGCAGA TCCGCGGCAA ACGCTTGAAG AACCGCATCA TGTCAACCGG GCACGACACC TGCCTGCCCA CCGACAACCT GGTCAACGAC AAGCTGATCG CCTACCAGCG GGACCGTGCT GCCGGTGGCG TCGGCCTGAT CGTGCTGCAG GTCGCCGGGG TGCACGACAG TGCCCGCTAC ACCTCACACG TACTGATGGC CACCGACGAT GCGTGCATTG ATGGCTACCG CCAGCTCGCC GAGGCTTGTC ATGCGCACGG CACCGTGGTG CTGTCGCAGC TGTTCCACCC CGGGCGGGAG ATCATGGAGT CGGCGGACGG CCTGCTGGCG GTGGCCTACT CGGCCTCAGC AGTGCCCAAT GAGCGCTTCC GGGTAATGCC GCGCGCGTTG GACCAGGCGA TGATCGACGA AATCGTCCAG GGCTATGCCA GCGCCGCCCG CCGCCTGCAC CAGGCCGGGC TGGATGGCGT CGAGGTGGTC GCCAGCCATG GCTATCTGCC CGCGCAGTTC CTCAACCCGC GGGTGAACCT GCGCAGCGAT GGCTACAACG GCGAACTGGC GCAGCGCTTG AGGTTCTTGC GCGAAGTGCT GGCCGCTGTG CGCGCCGCCA CCGACGAACA TTTCATCATC GGCCTGCGCA TCAGCGCTGA CGAGCGCGAC ACCCAGGGCC TGAGCGAAGA CGAGTCACTG GCGGCCGCCG TGGCCTTGCA GGGCCAGCTC GATTACCTGC ATATCGTCGC CGGCACCTCG GCATCGCTGG GCGGCGCCGT GCATATCGTG CCGCCGATGG CGATCGAGGC GGCTTACTTG GCCCGCGAGG CCGGCACCTT CAAGCAACAG CTCGATATAC CGCTGTTCGT CACCGGGCGC ATCAACCAGC CCCAGGAAGC CGAGCTGATC CTGGCGCGCG GCCAGGCCGA TGTGTGCGGC ATGACCCGAG CGTTGATTTG CGACCCGTTG ATGCCGAGCA AGACCGAACG CGGCCAGGTC GAGGACGTAC GTGCCTGCAT CGCGTGCAAC CAGGCCTGTA TCGGCCATTT CCACCGTGGT TTGGCCATTT CCTGCATTCA GCGTCCAGAA ACCGGTCGTG AGCTGCAATA CGGGCAACTT ACGCCCGCCA TTTCGCCCAA GCGCATCATG GTCGCAGGTG GCGGGCCTGC CGGTATGAAG GCCGCCGCCG TGGCCGCCGC GCGCGGGCAC CAGGTCACCC TGTACGAGGC CGGCCCGCAG CTGGGTGGGC AGGTGTTGCT GGCCCAGCTG CTGCCACGGC GTAGCGAGTT CGGCGGTGCC AGCACCAACC TGCAGCGGGA AATGGCCCTG GCCGGTGTAG AGGTAGTGCG CAATACCCGG GTCGACCGCG CCCTGGTCGA ACGCGAGCGC CCGGACCTGG TCATCGCGGC AACCGGTGCC ACCCCATACT GGCCGGCGTT CGAGCGTACC GGGGAGCTGC AGGTGGTGGA CGCCTGGCAA GTCCTGCGCA ATGAAGTGAA GCTGGGGCGT TCGGTGCTGG TGGTCGACTG GCGCTGCGAC TGGATCGGCC CCGGTATCGC CGAACGCCTA GTACGCGAGG GCCATCAGGT GCAATTGGCG GTAAACGGCA CCCATTGCGG CGAAAGCCTG CCGCTTTATG TACGCGATCA ACTGGCCGGC GAGCTGCATC GCCTGGGCAT CCCCATCACC CCTTATGCCC GCCTGTATGG CAGCGACGAC AATACGGTGT ACCTGCAGCA CACCGCCAGC GGCGAACCAA TGATCTTCGA AGGCATCGAC ACCCTGGTGC TGTGCCTGGG CCATCAACCG GAAGACCGCC TTGCCACTGA ACTGGCAGGC CTGGTGGAGG TACGACGGAT TGGCGACTGC CTGGCGCCGC GCACGGCCGA AGAGGCCATT CACGATGGCC TGACAGTTGC CTGGGCGCTC TGA
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Protein sequence | MQTAFPHLFE ALQIRGKRLK NRIMSTGHDT CLPTDNLVND KLIAYQRDRA AGGVGLIVLQ VAGVHDSARY TSHVLMATDD ACIDGYRQLA EACHAHGTVV LSQLFHPGRE IMESADGLLA VAYSASAVPN ERFRVMPRAL DQAMIDEIVQ GYASAARRLH QAGLDGVEVV ASHGYLPAQF LNPRVNLRSD GYNGELAQRL RFLREVLAAV RAATDEHFII GLRISADERD TQGLSEDESL AAAVALQGQL DYLHIVAGTS ASLGGAVHIV PPMAIEAAYL AREAGTFKQQ LDIPLFVTGR INQPQEAELI LARGQADVCG MTRALICDPL MPSKTERGQV EDVRACIACN QACIGHFHRG LAISCIQRPE TGRELQYGQL TPAISPKRIM VAGGGPAGMK AAAVAAARGH QVTLYEAGPQ LGGQVLLAQL LPRRSEFGGA STNLQREMAL AGVEVVRNTR VDRALVERER PDLVIAATGA TPYWPAFERT GELQVVDAWQ VLRNEVKLGR SVLVVDWRCD WIGPGIAERL VREGHQVQLA VNGTHCGESL PLYVRDQLAG ELHRLGIPIT PYARLYGSDD NTVYLQHTAS GEPMIFEGID TLVLCLGHQP EDRLATELAG LVEVRRIGDC LAPRTAEEAI HDGLTVAWAL
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