| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_2904 |
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| Symbol | |
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| ID | 5870690 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 3256073 |
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| End bp | 3257077 |
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| Gene Length | 1005 bp |
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| Protein Length | 334 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641548022 |
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| Product | bile acid:sodium symporter |
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| Protein accession | YP_001669134 |
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| Protein GI | 167033903 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0385] Predicted Na+-dependent transporter |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 0.731183 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 47 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACACAG TGATGAAGTA TCTACGCATG TTATTCGACA ATTTCACCCT GGCCTTGCTC
GGGGTGGTGC TTATCGCCAC CGTGCTGCCT TGCTCGGGCG ATGGCGCGGT GTATTTCGGC
TGGCTGACCA ACCTGGCCAT CGGCCTGCTG TTCTTCCTGC ATGGCGCCAA GCTGTCGCGT
GAAGCGATCA TTGCCGGTGC CGGGCACTGG CGCCTGCACC TGCTGGTGTT TGCCTGTACG
TTCGTGCTGT TCCCGCTGCT GGGCCTGGCA TTCAAGCCGC TGTTCGTGCC ACTGGTGGGT
AACGAGCTTT ACCTGGGCGT GCTCTACCTG TGCGCCTTGC CGGCTACCGT GCAGTCGGCC
ATCGCCTTCA CCTCGTTGGC CCGTGGCAAT GTGCCGGCGG CGATCTGCAG TGCGGCGGCT
TCCAGCCTGC TGGGTATCTT CCTGACGCCG TTGCTGGTGA TGATGTTGCT GGGCGCCAGT
GGTGATACGG GCTCTGGGCT GGATGCGGTG TTGAAGATCA CCCTGCAACT GCTGGTGCCG
TTCGTTGCTG GCCAGATTGC GCGGCGCTGG ATTGGCGCCT GGGTCAAGCG CAATGCGCGG
TGGCTCAAGG TGGTGGACCA GGGGTCGATC TTGCTGGTGG TGTACACGGC CTTCAGCGAG
GCTGTGGTGA CCGGCCTGTG GCACACCGTA TCGCCGCAGC ACCTGGCCGG CTTGTTCGTG
GTGTGCGGTA TTTTGCTGGC GGTGGTGCTG TTTGGTACTC GCCTGCTTGG CAAGGCATTG
GGCTTCGACC TCGAGGACCG CATCACCATC CTGTTCGCCG GTTCCAAGAA AAGCCTGGCT
ACCGGCGTAC CCATGGCCCA GGTGTTGTTC GTGGGCAGTG GTATTGGCGC GATGATCTTG
CCGCTGATGC TGTTCCACCA GATTCAGCTG ATGGTGTGTG CTGTGCTGGC GCAGCGTTAC
GCCAGCCGTG AGCAGGTGGC GCAAGAGGCT TCGGCGGCGC CCTGA
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| Protein sequence | MDTVMKYLRM LFDNFTLALL GVVLIATVLP CSGDGAVYFG WLTNLAIGLL FFLHGAKLSR
EAIIAGAGHW RLHLLVFACT FVLFPLLGLA FKPLFVPLVG NELYLGVLYL CALPATVQSA
IAFTSLARGN VPAAICSAAA SSLLGIFLTP LLVMMLLGAS GDTGSGLDAV LKITLQLLVP
FVAGQIARRW IGAWVKRNAR WLKVVDQGSI LLVVYTAFSE AVVTGLWHTV SPQHLAGLFV
VCGILLAVVL FGTRLLGKAL GFDLEDRITI LFAGSKKSLA TGVPMAQVLF VGSGIGAMIL
PLMLFHQIQL MVCAVLAQRY ASREQVAQEA SAAP
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