Gene PputGB1_2892 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_2892 
Symbol 
ID5870678 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp3247395 
End bp3248207 
Gene Length813 bp 
Protein Length270 aa 
Translation table11 
GC content63% 
IMG OID641548010 
Productexonuclease III 
Protein accessionYP_001669122 
Protein GI167033891 
COG category[L] Replication, recombination and repair 
COG ID[COG0708] Exonuclease III 
TIGRFAM ID[TIGR00195] exodeoxyribonuclease III
[TIGR00633] exodeoxyribonuclease III (xth) 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.0279312 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones49 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGATCG TCTGTTTCAA CATCAACGGC CTGCGGGCCC GCCCGCACCA GCTGGCGGCG 
CTGATCGAAA AGCACCAGCC GGACGTGATC GGCCTGCAGG AAACCAAGGT CAGCGACGAT
CAGTTCCCGC TGGCCGACGT GCAGGCACTG GGCTACCACG TGCACTACCA TGGCCAGAAA
GGCCACTACG GCGTGGCGCT GCTGTCGCGC CAGGCGCCGC TGAGCCTGCA CAAAGGCTTT
GCCACCGATG AAGACGACGC CCAGCGCCGC TTTATCTGGG GCACCTTCCC TGATGCCGAC
GGCAACCCGA TCACCATCAT GAACGGCTAT TTCCCCCAGG GTGAAAGCCG CGACCACCCC
ACCAAGTTCC CGGCCAAGCA GCGCTTCTAC AGCGACCTGC AGGCCCTGCT CGAAGGCCAG
TTCCGCAACG ACCAGCCACT GCTGGTGATG GGCGACATGA ACATCTCGCC GCAGGACTGC
GATATCGGCA TCGGTGCGGA CAACGCCAAG CGCTGGCTGA AGACCGGCAA GTGCAGCTTC
CTGCCGGAAG AGCGCGAGTG GATGGAACGC TTGAAAGGCT GGGGCCTTGT CGATAGTTTC
CGTCACCTGT ACCCGGAGGT GACGGACCGC TTCAGCTGGT TCGACTACCG CAGCCGCGGC
TTCGAGGACG ACCCCAAGCG CGGGCTGCGC ATCGACCTGA TCATGGCCTC GCAGCATCTG
GTGCCACGCA TCAAGGCAGC AGGTGTGGAC TATGAACTGC GCGCAATGGA AAAGCCGTCG
GACCATGCGC CGATCTGGCT GGAATTGAGC TGA
 
Protein sequence
MKIVCFNING LRARPHQLAA LIEKHQPDVI GLQETKVSDD QFPLADVQAL GYHVHYHGQK 
GHYGVALLSR QAPLSLHKGF ATDEDDAQRR FIWGTFPDAD GNPITIMNGY FPQGESRDHP
TKFPAKQRFY SDLQALLEGQ FRNDQPLLVM GDMNISPQDC DIGIGADNAK RWLKTGKCSF
LPEEREWMER LKGWGLVDSF RHLYPEVTDR FSWFDYRSRG FEDDPKRGLR IDLIMASQHL
VPRIKAAGVD YELRAMEKPS DHAPIWLELS