| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_2873 |
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| Symbol | |
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| ID | 5870659 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 3225392 |
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| End bp | 3226642 |
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| Gene Length | 1251 bp |
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| Protein Length | 416 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641547991 |
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| Product | hydroxyglutarate oxidase |
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| Protein accession | YP_001669103 |
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| Protein GI | 167033872 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0579] Predicted dehydrogenase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTACGATT TCATCATTAT TGGCGGTGGC ATTGTGGGCA TGTCCACGGC CATGCACCTG
ATCAAGGTCT ACCCGGACGC AAAGATTCTC CTGCTGGAGA AAGAGTCTGG CCCGGCCCGC
CACCAGACCG GCCACAACAG CGGCGTGATC CACGCCGGTG TGTATTACAC CCCCGGCAGC
CTCAAGGCGC GCTTCTGCCT GGAAGGCAAC AAGGCCACCA AAGCCTTCTG CACCCAGCAC
GGCATCCGCT TCGATGAGTG CGGCAAGCTG CTGGTAGCCA CGAACGACCT GGAAATGCAG
CGCATGAAGG CGCTGTGGGA GCGTACTGCG GCCAATGGCC TGGAACGCTA CTGGCTGTCG
GCTGACGAAT TGCGCGAGCG CGAGCCCAAC ATCGTTGGCA TGGGTGGCAT CTTCGTGCCG
TCCAGTGGCA TCGTCAATTA CGCTGAAGTC ACTGCTGCCA TGGGCGCCGA ATTCCAACGT
GCCGGCGGTG AAATCCGCTA TGGCGCCGAG GTGGTCGGCC TGCAGGAGCA GGCCAGTGAA
GTGATCGTGC GCACTCAGCG CGACGAGTTC CGCAGCCGTT TCCTGGTGAC TTGCTCGGGC
CTGATGGCCG ACCGAGTGGT GAGCATGCTG GGCCTGCGCA CCGAGTTCGT AATCTGCCCG
TTCCGTGGCG AGTACTACCT GCTGCCCAAA CAGCACAACC AGATCGTCAA CCACCTGATC
TACCCGATCC CCGACCCGTC GATGCCTTTC CTGGGTGTGC ACTTGACCCG CATGATCGAC
GGCACCGTCA CCGTTGGCCC CAATGCTGTA CTGGCGATGA AACGCGAGGG CTACCGCAAG
ACCGACGTCA GCCCCAGTGA CTTGTTCCAG ACCCTGACCA CCCCTGGCAT CCTCAAGGTG
CTGGCGAAGA ACTTCCGCCC GGGCCTGATC GAGATGAAGA ACTCGCTGTT CAAGGGTGGG
TACCTCAAGC AAGTACAGAA ATACTGCCCG AGCATCACCA AGGCCGACCT CACGCCTTAC
CCGGCTGGTG TGCGTGCCCA GGCAGTATCG CGTGATGGCA AGCTGATCGA CGACTTCCTG
TTCGTCAACA CCGCGCGCAG CGTCAACGTG TGCAACGCAC CGTCGCCAGC TGCCACCTCG
GCTATCCCGA TCGGCGCCTA TATCGTCGAG AAAGTTTGCG AGCAGGTCAG CCTCCAGGGC
GGCAGCTTCC CCAAAGCAGA CCTGGCTGCC AACCAGCGGG CGGCTAGCTG A
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| Protein sequence | MYDFIIIGGG IVGMSTAMHL IKVYPDAKIL LLEKESGPAR HQTGHNSGVI HAGVYYTPGS
LKARFCLEGN KATKAFCTQH GIRFDECGKL LVATNDLEMQ RMKALWERTA ANGLERYWLS
ADELREREPN IVGMGGIFVP SSGIVNYAEV TAAMGAEFQR AGGEIRYGAE VVGLQEQASE
VIVRTQRDEF RSRFLVTCSG LMADRVVSML GLRTEFVICP FRGEYYLLPK QHNQIVNHLI
YPIPDPSMPF LGVHLTRMID GTVTVGPNAV LAMKREGYRK TDVSPSDLFQ TLTTPGILKV
LAKNFRPGLI EMKNSLFKGG YLKQVQKYCP SITKADLTPY PAGVRAQAVS RDGKLIDDFL
FVNTARSVNV CNAPSPAATS AIPIGAYIVE KVCEQVSLQG GSFPKADLAA NQRAAS
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