Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_2855 |
Symbol | |
ID | 5870641 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | - |
Start bp | 3199119 |
End bp | 3199937 |
Gene Length | 819 bp |
Protein Length | 272 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 641547973 |
Product | hypothetical protein |
Protein accession | YP_001669085 |
Protein GI | 167033854 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 0.337244 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 0.112469 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGATTGAGC ATGAGACAAA AGCGTTATGG AAGCGTGCGA TAGGCTGGAG CTACGATCTT CCGCACGTTG ATGAAGTGCC AGCCCCCCGT TTTAGTGTGG AGGACATAAA GCCGTCGCCA AACCATATTG ATGATGTGTT CCTGGAGTTG CCTCGGTCAA CCATCATTTT GCGCGGTGTT ATAGCTTTGA TTAGTGCTCC GATGCTGATG TTTCTGTTTG GTTTAATGGT GTGGATGTAT TGGGGTTTCT TCAGTTATGG CTTGGTGGAT GATTGGTCGG TGATCGTTCT TGCGGTTTTG GTTCCAGTTG TTTCACTCTG GGCTATTATT CCATTTGTTA AATTGGACTT ATTGCTTCCA AGAGATGAAC CTATCCGCTT CAATCGCCTG CGACGAAAGA TCTATCTCTA TCAATTTCGA TTCAACTATT TCTACCTGTT TAGCCGTAAA CACTGGGGTG TAAAGCCTGT CGCTTACAAC TGGGACGACG TAACCGCCGA GGTCTACCGA GTCTATGCTC CCGGCCACGG TGGTCTGATA GAGAACGTCA TGCTCTCTGT CCGCAACCCG GAAACCAATG AAGTCATCGA TCGCGTATTG TTCACTTCCA ACCTTTACCG AGGCGAGGCC TACTGGGCCA TCGCCCGGTT GTTCATGCAA CAAGGCCCCG AAGCCCTGCC AAAGTTCGTC CACCCGCCCC GTGACTGGAA CGACGACGAT GGCCTGAGCC ACATGCACTG CCTGGCGCCG AAGGTTAAAT GGCCAGCGGA CATTGACCGC GAATCCCGTA CCGCACCGTC TGAAGGAGAA GCCCAATGA
|
Protein sequence | MIEHETKALW KRAIGWSYDL PHVDEVPAPR FSVEDIKPSP NHIDDVFLEL PRSTIILRGV IALISAPMLM FLFGLMVWMY WGFFSYGLVD DWSVIVLAVL VPVVSLWAII PFVKLDLLLP RDEPIRFNRL RRKIYLYQFR FNYFYLFSRK HWGVKPVAYN WDDVTAEVYR VYAPGHGGLI ENVMLSVRNP ETNEVIDRVL FTSNLYRGEA YWAIARLFMQ QGPEALPKFV HPPRDWNDDD GLSHMHCLAP KVKWPADIDR ESRTAPSEGE AQ
|
| |