Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_2841 |
Symbol | |
ID | 5870627 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | + |
Start bp | 3184648 |
End bp | 3185322 |
Gene Length | 675 bp |
Protein Length | 224 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641547959 |
Product | YheO domain-containing protein |
Protein accession | YP_001669071 |
Protein GI | 167033840 |
COG category | [S] Function unknown |
COG ID | [COG2964] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 0.378743 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCCCATTT CCCCCGCTGA AGAACGCCAC CTCACCCTCA CCGTGCTCAA AGCCGCCATC CAGGCCTTGG GCAGCGTTGC CGCACGCAAC ATGGAAATCC TGCTGCACGA CCTGGACCAC CCGGAGCATT CCGTGGTGGC GATCGTCAAC GGCCATCTCT CCGGCCGTAG CGTCGGCAGC CCGATCCTCG CCGCCCCGGA GCAGGACCAA GGCTTCAAGG CGCTGATGCA GGCCTCGGCC GAGCAGCATG GCTGCGAGCC GGTGGTACTG CCCGACTACC CCACCACGCT CAAGGGCCGC ACGCTGCGCA GCGCCACCGC AATCTTTCGC GACAGCAACG GCCACCCCTT CGCCAGCCTC TGCGTCAACA CCGACGTCAC CGGCCTGGAC GCCGCCATGA GCTTTCTCCA GCAGTTCCAA CCGCTGGGGG CCACGCCTGC CGTCAACGAA CCCGCCGACA TGGAACTGCT GATGAGCGAG ATCATTCAGG CTGCCTTGCA ACGCAGCGGC CAGGGCCGGA TGAACAAACA GGCCAAGGTC GAAGCCGTAC AGGTCATGCA GGAGCGCGGC CTGTTCATCG TCAAAGGCGG CGTGGAAAAG GCCGCCAGTG CCCTCGGCGT AACCCGCTAC ACCATTTACA ACTACCTTGA ACAACTGCGC GGAGCCAGCC AATGA
|
Protein sequence | MPISPAEERH LTLTVLKAAI QALGSVAARN MEILLHDLDH PEHSVVAIVN GHLSGRSVGS PILAAPEQDQ GFKALMQASA EQHGCEPVVL PDYPTTLKGR TLRSATAIFR DSNGHPFASL CVNTDVTGLD AAMSFLQQFQ PLGATPAVNE PADMELLMSE IIQAALQRSG QGRMNKQAKV EAVQVMQERG LFIVKGGVEK AASALGVTRY TIYNYLEQLR GASQ
|
| |