| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_2829 |
|---|
| Symbol | |
|---|
| ID | 5870615 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida GB-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010322 |
|---|
| Strand | - |
|---|
| Start bp | 3173974 |
|---|
| End bp | 3174309 |
|---|
| Gene Length | 336 bp |
|---|
| Protein Length | 111 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 641547947 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001669059 |
|---|
| Protein GI | 167033828 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.00084686 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 0.0916172 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGAAGCAA GAAGCGTTGT CGCCGAAATG TTCATTGGGA TCCCGACGCA TTTTTGGGTG
TTGCCGGTTG CTGGCCTGGT TGCTTACTAC GGCCTGAAGT GGTCCGCCAG GCTCGGCAAT
CGTGCCACTT GGCTGCAAGC CTCGACCTAC TTGTCATTGC TGGCGCTGGC TGTGCTGCCC
AACGGCTTTT ATGCCCTGTT TCCGCCCGCG CCTGACCCGG ATGTGCTGTT GAATCACGCA
CCGCTGCCCA ACTATGCAGG GCGCTTCTAC CTCGATGCAT TCTATGTCTT CAGTGGTTGG
GCGCTGAGCA AAGTGTTGAA GCTCAAGTTC AGCTGA
|
|---|
| Protein sequence | MEARSVVAEM FIGIPTHFWV LPVAGLVAYY GLKWSARLGN RATWLQASTY LSLLALAVLP
NGFYALFPPA PDPDVLLNHA PLPNYAGRFY LDAFYVFSGW ALSKVLKLKF S
|
|---|
| |