Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_2814 |
Symbol | |
ID | 5870600 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | + |
Start bp | 3163403 |
End bp | 3164410 |
Gene Length | 1008 bp |
Protein Length | 335 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 641547932 |
Product | AraC family transcriptional regulator |
Protein accession | YP_001669044 |
Protein GI | 167033813 |
COG category | [K] Transcription |
COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.323358 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 0.871008 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCCTGCTC TCGTTCGTGC CGCCAGCTTG ACCAACTACC TGGAAGTGTC CCGCCATCTG GGCCTCAACC CCCATGCACT GCTTGCGCAG GTCGGCCTTA ACGCCGCCTT GCTCGACGAC CCCAACCGGC GTATCCCGGT GGCCAGCGTC ATCAGTTTGC TGGAAGCTTC CGCCAGCGCC ACGAAGTGCG AGAGTTTTGG GTTGCGCATG GCCGAGCTGC GCCAGCTATC GGACTTCGGC GAAATCAGCC TGTTGCTCAG CCACCAACGC AACCTGCGCG ATGCGCTGCA GGTGATCGTG CAATACCGCC ACCTGCTCAA TGACGCGCTG GCCATTCATA TCGAAGAAGC CGGCAAGACC GTGATCATTC GCGAAGAGGT GATCAACGAA CGCGCGCCCT GCAGCCGCCA GGCCACCGAG TTGGCCATCG GCGTGATGAT GCGCTTGTGC GCGGCACTGC TGGGCGCCCA CTGGCACCCG ATCAGTGCCA ACTTCACGCA TGCGGCCCCC GCCGACCCCG CCATTCATCG GCGCATCTTC GGCTGCACGC TGGTGTTCGG CAGCGAGTTC AACGGTATCG TCTGCCCCGC CGCCGACCTC GACAGCGCCA GCCCGCAGGC CAACGAAGCC ATGGCCCGCC TGGCACGGCG CTACCTCGAC ACGCTGCCGG CCAGCGGCGT ACCGTCGCTG GAACTGGAAC TGCGTAAAAC CATCTACCTG CTGCTGCCCA TGGGCCGTGC CACCATCGAG CAGGTGGCGC AGACCCAGGG CATGAACGTG CGTACATTGC AGCGGCGGCT GGAAGAAAAT GGTTTGACGT TCAAGGACCT GATCAACAAC GTGCGCCGCG ACCTGGTGAT GCGCTACCTG GAAAACCCCG GTTACTCGCT GGGGCGCATC GCCGACATGC TCGGTTACTC GATGCCCAGT TCGTTCACCC GTTGGTTCAT CGCCCAGTTC GGCATGCCAC CGGCTGTTTG GCGGGCTCAG CACACGCCGC AGCCATGA
|
Protein sequence | MPALVRAASL TNYLEVSRHL GLNPHALLAQ VGLNAALLDD PNRRIPVASV ISLLEASASA TKCESFGLRM AELRQLSDFG EISLLLSHQR NLRDALQVIV QYRHLLNDAL AIHIEEAGKT VIIREEVINE RAPCSRQATE LAIGVMMRLC AALLGAHWHP ISANFTHAAP ADPAIHRRIF GCTLVFGSEF NGIVCPAADL DSASPQANEA MARLARRYLD TLPASGVPSL ELELRKTIYL LLPMGRATIE QVAQTQGMNV RTLQRRLEEN GLTFKDLINN VRRDLVMRYL ENPGYSLGRI ADMLGYSMPS SFTRWFIAQF GMPPAVWRAQ HTPQP
|
| |