| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_2793 |
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| Symbol | |
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| ID | 5870579 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 3139914 |
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| End bp | 3140684 |
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| Gene Length | 771 bp |
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| Protein Length | 256 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641547911 |
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| Product | 3-hydroxybutyrate dehydrogenase |
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| Protein accession | YP_001669023 |
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| Protein GI | 167033792 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | [TIGR01963] 3-hydroxybutyrate dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 0.313223 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.208363 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCTCA ACGGCAAGAC TGCACTCGTC ACCGGTTCCA CCAGCGGCAT CGGCCTGGGC
ATCGCCCAGG TGTTGGCCCG CGCGGGTGCC AACATCGTGC TCAACGGCTT TGGCGACCCG
GCACCGGCCA TGGCCGAGAT TGCCCGGCAC GGGGTGAAGG TGGTCCATCA CCCGGCAGAC
CTGTCGGACG TGGCCCAGAT CGAGGCCTTG TTCAACCTGG CAGAAGGCCA ATTTGGCGGC
GTCGACATTC TGGTCAACAA CGCCGGTATT CAGCATGTGG CGCCGGTGGA GCAGTTCCCC
ACCGAAAGCT GGGACAAGAT CATTGCCCTG AACCTGTCGG CTGTATTCCA TGGCACCCGT
TTGGCGCTGC CGGGCATGCG CACGCGCAAC TGGGGGCGGA TCATCAACAT CGCTTCGGTG
CATGGTTTGG TGGGTTCGAC CGGCAAGGCA GCCTACGTGG CGGCCAAGCA CGGTGTAGTC
GGGCTGACCA AGGTGGTAGG CCTGGAAACC GCCACCAGCA AGGTCACCTG CAACGCGATC
TGCCCAGGTT GGGTATTGAC CCCGCTGGTA CAGAAACAGA TCGACGATCG TGCCGCCAAC
GGTGGCGATC CACTGCAAGC GCAACACGAT CTATTGGCAG AAAAGCAACC GTCCTTGGCC
TTCGTTACCC CCGAGCACTT GGGTGAACTG GTACTATTCT TGTGCAGCGA GGCCGGTAGC
CAGGTTCGCG GCGCCGCCTG GAACGTCGAT GGTGGCTGGT TGGCCCAGTG A
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| Protein sequence | MTLNGKTALV TGSTSGIGLG IAQVLARAGA NIVLNGFGDP APAMAEIARH GVKVVHHPAD
LSDVAQIEAL FNLAEGQFGG VDILVNNAGI QHVAPVEQFP TESWDKIIAL NLSAVFHGTR
LALPGMRTRN WGRIINIASV HGLVGSTGKA AYVAAKHGVV GLTKVVGLET ATSKVTCNAI
CPGWVLTPLV QKQIDDRAAN GGDPLQAQHD LLAEKQPSLA FVTPEHLGEL VLFLCSEAGS
QVRGAAWNVD GGWLAQ
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