| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_2769 |
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| Symbol | |
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| ID | 5870555 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 3105940 |
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| End bp | 3108537 |
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| Gene Length | 2598 bp |
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| Protein Length | 865 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641547887 |
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| Product | type VI secretion ATPase |
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| Protein accession | YP_001668999 |
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| Protein GI | 167033768 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0542] ATPases with chaperone activity, ATP-binding subunit |
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| TIGRFAM ID | [TIGR03345] type VI secretion ATPase, ClpV1 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.186875 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 0.804579 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAACCTGA AGTCTCTGTT CGCCAAGCTA AACGAAACCA GCCGCACGGC CACCGAAAGC
GCGGCGGCCC TGTGCCTGTC GGAGCATCAC TACGATGTCG AGGTTGAGCA CCTGCTGCTG
CAACTGCTCG ACAGCAGTGA CAATGACCTG GCACCGATCC TGCGCCACTA TGAGGTCGTC
ACCGAGCGCC TGCAGGCGCA ACTGGTCACC GCCCTGGGCA CCTTCAAGAA AGGCAATACC
CGTACCCCAG CGCTGTCGCC GCACATCACC CGCATGATCG AGCAGGCCTG GTTGCTGGCA
TCGATCGAGT ATGGCGTTGG CCAAGTACGC AGCGGCCACT TGCTGCAAGC CCTGCTTGAT
GATGCCGAAC TGCGCCGAGT GGTGATGGCT TCGGCACCGG AGCTGGAAAA GATCAATGCC
AATGACCTGC GCCTGAACCT TGCCGCACTG GTCGAAGGTA GCGCCGAGTC GCGGCAGGCC
AGCCCCCTGG CCAGCCCCGC AGCACCGATT GCCAGCAGCA CTAAAGCTGG GGGCAAGACC
CCAGCGCTGG ACCAGTACAC CGTCAACCTT ACCCAAAGTG CCCGCGAAGG CCGCATTGAC
CCAGTCCTGG GCCGCGAGTT CGAAGTGCGG CAAATGGTCG ACATCCTCAC CCGTCGCCGG
CAAAACAACC CGATTCTCAC CGGTGAAGCC GGGGTCGGCA AAACCGCCGT GGTCGAGGGC
CTGGCCCTGA GAATCGCCCA GGGCGATGTA CCAGCGGTGC TCAAGGATGT GGCCCTGCAC
ACCCTTGACC TGGGCCTGCT GCAGGCGGGC GCCGGGGTAA AGGGCGAGTT CGAAAACCGC
CTGAAAGCGG TCATCGAAGA GGTCAAGCGC AGCCTGCACC CAATCATCCT GTTCATCGAC
GAAGCCCACA CCCTGATCGG TTCTGGCGGC CAGGCCGGGC AGAACGATGC CGCCAACCTG
CTCAAGCCGG CCCTTGCCCG TGGCGAACTG CGCACCATCG CCGCCACCAC CTGGGCCGAA
TACAAGAAGT ACTTCGAGAA AGACGCCGCC CTCGCCCGCC GCTTTCAGGT AGTAAAGGTC
GAAGAACCTG ATGAAGACAA AGCCATTCAC ATGCTGCGCG GGCTACTGGG CAAGATGCGC
GAGCACCACA AGGTGGCGGT GATGGACGAA GCGCTGGTAC AAGCGGTGCG CCTGTCCAAC
CGCTACATCA CCGGCCGCCA GCTGCCCGAC AAAGCCGTTA GCGTGCTCGA CACCGCCTGC
GCCCGCATCG CCCTGGCGCA GTCGTCGCAG CCAGGCTTGC TGGAAGACTG CCGTCGGCAG
ATCGACAACC TGCAGGCAGA AATCGCCGTT CTTGGCCACG AAGCGGGCAA AGGCCATGAC
CATGCCCGTC GCCTAGGCGA GCTGCAGGCC GCGTTGCAGA CCGAACAGCA GCGCGAGCAG
CAGCTCATCG CGCAGTGGCA ACAGGAGCTG GAACTGGTCG AGCAACTCAA GGCACTGGAT
GCCGCCAACG ACACCGACGC CGAGCAGCTC AATACCCTGC GCGCCGAACT GGCCCGTGTG
CAAGGTGACC AGCCACTGGT CCACGCCCTG GTCGACAGCG GCGCCATTGC CCAGGTCATC
AGCGGCTGGA CCGGCATCCC GCTGGGCAAG ATGCTGCGCG ACGAAATCGA TACCGTACAG
CGCCTGCCGG CCCTGCTGGG CGAGCGCGTA CTGGGCCAGG ACCATGCCCT GCAGGAAATC
GGCAAACGCA TCAAGATTTC CCGTGCGCGC ATGGAAGACC CCAACAAACC CATCGGCGTG
TTCCTGCTGC TCGGCCCCAG CGGCGTCGGC AAGACCGAAA CTGCCCTGGC CCTGGCCGAT
ACGCTGTACG GCGGCGAGCG CAACCTGATC ACCATCAACA TGTCCGAGTA CCAGGAGGCC
CACACCGTGT CGAGCCTCAA AGGCTCGCCC CCCGGCTACG TCGGTTACGG CGAAGGCGGC
GTGCTGACCG AGGCGGTACG CCGCAAACCC TACAGCGTGG TGCTGCTGGA CGAGGTGGAA
AAAGCCCACC CCGACGTACT CGAACTGTTT TTCCAGGTCT TCGACAAGGG CGTGCTGGAC
GACGGTGAAG GCCGCGAGAT CAACTTCCGC AACACAGTGA TCATCCTCAC CTCCAACACC
GGCACCGAAC GCATCATGCA AACCTGCCTG AATGCCACCG AGCTGCCAAC GCCAGAGGCC
ATCGTCGAAG GCCTGCGCAA CGAGCTCAAC CAAGTGTTCA AGCCGGCGTT TCTCGGCCGC
CTGAACATCG TGCCGTTCTA CCCGGTGCAG GACCAGATCC TCGAGCGCAT CGTCGCCCTC
AAGCTCGAGC GTATCGCCAA GCGCTTCGCC CGCAACCACC AGGCCGAGTT GGGCTACGAC
GAGGCGCTGG TCAAAGCCAT CGCCGCCCGT TGCACCGAGG TCGACAGCGG CGCACGCAAC
ATCGACAACA TCCTGTCGCA AACCCTGATG CCCGAGCTCG CCCAGCGTGT GCTCGAACGC
ATGGCCCAGG ACACACCGAT CGAGCGCCTT GTGATCGAAC TGGGCAGCGA TGGCGATTTC
GCCTATCGCC TGGCCTGA
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| Protein sequence | MNLKSLFAKL NETSRTATES AAALCLSEHH YDVEVEHLLL QLLDSSDNDL APILRHYEVV
TERLQAQLVT ALGTFKKGNT RTPALSPHIT RMIEQAWLLA SIEYGVGQVR SGHLLQALLD
DAELRRVVMA SAPELEKINA NDLRLNLAAL VEGSAESRQA SPLASPAAPI ASSTKAGGKT
PALDQYTVNL TQSAREGRID PVLGREFEVR QMVDILTRRR QNNPILTGEA GVGKTAVVEG
LALRIAQGDV PAVLKDVALH TLDLGLLQAG AGVKGEFENR LKAVIEEVKR SLHPIILFID
EAHTLIGSGG QAGQNDAANL LKPALARGEL RTIAATTWAE YKKYFEKDAA LARRFQVVKV
EEPDEDKAIH MLRGLLGKMR EHHKVAVMDE ALVQAVRLSN RYITGRQLPD KAVSVLDTAC
ARIALAQSSQ PGLLEDCRRQ IDNLQAEIAV LGHEAGKGHD HARRLGELQA ALQTEQQREQ
QLIAQWQQEL ELVEQLKALD AANDTDAEQL NTLRAELARV QGDQPLVHAL VDSGAIAQVI
SGWTGIPLGK MLRDEIDTVQ RLPALLGERV LGQDHALQEI GKRIKISRAR MEDPNKPIGV
FLLLGPSGVG KTETALALAD TLYGGERNLI TINMSEYQEA HTVSSLKGSP PGYVGYGEGG
VLTEAVRRKP YSVVLLDEVE KAHPDVLELF FQVFDKGVLD DGEGREINFR NTVIILTSNT
GTERIMQTCL NATELPTPEA IVEGLRNELN QVFKPAFLGR LNIVPFYPVQ DQILERIVAL
KLERIAKRFA RNHQAELGYD EALVKAIAAR CTEVDSGARN IDNILSQTLM PELAQRVLER
MAQDTPIERL VIELGSDGDF AYRLA
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