| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_2766 |
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| Symbol | |
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| ID | 5870552 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 3102607 |
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| End bp | 3103089 |
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| Gene Length | 483 bp |
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| Protein Length | 160 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641547884 |
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| Product | type VI secretion system lysozyme-related protein |
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| Protein accession | YP_001668996 |
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| Protein GI | 167033765 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3518] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR03357] type VI secretion system lysozyme-related protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.0113374 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 0.377174 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTAACC AGGCCCGCCT GCTGCCCTCG CTGCTCGACC GACTGCTGGA CGACCGTCCC
TATCAGTCGG CCGAGCCGGC CGCGCAGCGT ACCTGCTCGC TGGCCGAGTA CAAGGCCAGC
ATCGTCCGCG ACCTGGAAGT GCTGGTGAAT ACCCGCCAAT CGCTGGTCGC CGAGGCGCTC
GACGGTTTCA GCCAACTCGG TGGTTCCATC CTTGAATACG GCATGCCTGA CTTCATCAGC
CGCAGCGTGC TCGACCCACA CGATCGTCGT CTTATTCAGC AGCAGCTGGA GCGTGCGATA
AGCACCGGCG ACCGGCGCTT TCGCCGGGTC CGTGTGCAGC TCTTGGCCCA GCAGGACGGC
CACCGCATGT TGACCTTCCG CGTGGACGCC GTGTTGCGTC TGCAGGACAT CAGCCGCCAG
GTGTCGTTCG ACGCCGTGCT GCAGGTCAAC ACCCAGGAAT ACAAAGTGCA GAACCTCAAC
TGA
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| Protein sequence | MSNQARLLPS LLDRLLDDRP YQSAEPAAQR TCSLAEYKAS IVRDLEVLVN TRQSLVAEAL
DGFSQLGGSI LEYGMPDFIS RSVLDPHDRR LIQQQLERAI STGDRRFRRV RVQLLAQQDG
HRMLTFRVDA VLRLQDISRQ VSFDAVLQVN TQEYKVQNLN
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