| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_2681 |
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| Symbol | |
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| ID | 5870469 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 3006069 |
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| End bp | 3007319 |
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| Gene Length | 1251 bp |
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| Protein Length | 416 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 641547802 |
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| Product | outer membrane porin |
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| Protein accession | YP_001668914 |
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| Protein GI | 167033683 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.340362 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATCACA CCCCTTGCGT TGCCCTGGGC CTGACGTTGC TCAGCCAGCC ACTGCTGGCT
GCCGAAGGCG GCTTCTTCGA GGACTCGAAG GCCACCTTGA GTGCCCGTAA CTACTACTTC
AGCCGCGATT TCTCCGACAT CGTCGGGGCC AACAAGCAGT CCAAAGCCGA GGAGTGGGCC
CAGGGCTTCA TCCTCGACTT CAAGAGCGGC TACACCCCAG GCACGGTCGG CTTTGGCGTG
GATGCCCTGG GCCTGCTTGG CATCAAGCTC GACAGCAGCC CCGACCGGGC CAACACTGGC
CTGCTGCCGG TGCATGGCGA TGGCCGCGCT GCCGACGAGT ACAGCCGCCT GGCACCCACC
TTCAAGGCAC GGCTATCAAA AACCGAGCTG CGTATAGGCG AGCTGCAACC GAACCTGCCG
GTGCTGACCT TCAGTGATAT TCGCCTGCTG CCACCGACCT ACCAGGGCGC CAGTTTGAGT
TCGTCGGAAA TCGACGGGCT GACCCTGCAG GCCGGTCACT TGAAAAGCAC CCACCTGCGC
AACGAGGGCG GCGATGGCAA GATGAACGCG ATGCTCGGCC ATGTGCCGAT GCGCCAGGCT
GAGAGTGATG CGTTCAACTA CGTGGGTGGC GACTACGCCT TCAATGCCAA CCAGAGCAGT
GTCAGCCTGT GGTACGGGCA ACTCGAAGAC ATCTACGAGC AGGGCTTCGT CGGCCTGAAG
CACAGCAAGC CAGTGGGCGA CTGGGTACTC AGCGCCAACC TGGGGTACTT CACGGCACGC
GAGGATGGCG ATGCTTTGCT GGGCAATATC GACAACCAGG CCTTCTTCTC GATGTTCACC
GCCCGGCATG GCGGCCACAG TTTCCATGTG GGTTACCAGG GCATCTATGG CGACAGCCCG
TTCCCACGGG TATTCGCCAA CATTTCGCCG CTGGGTAACG AGGTGCCGAC CTATGAGTTT
GCCTATACCG ACGAACGCTC GTACCAAGTG CGTTACGACT ACAACTTCGC CGCCATGGGC
GTACCGGGGC TGACGGCGAC CGTTCGCTAC ATAACGGGTA ACAATGTCGA TACCGGGCTG
GGTTACGAAG GGCGTGATCG CGAGCGTGAC CTGGATATTG GCTATGCGGT GCAGAGCGGG
GTGCTGAAGG GGCTGGGGAT TCGGGTGCGC AATGCCATGG CGCGGTCCAA CTACCGCAGC
GACATCGACG AAAACCGCCT GACGCTGGTG TACACATGGC AACTGTTCTA G
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| Protein sequence | MNHTPCVALG LTLLSQPLLA AEGGFFEDSK ATLSARNYYF SRDFSDIVGA NKQSKAEEWA
QGFILDFKSG YTPGTVGFGV DALGLLGIKL DSSPDRANTG LLPVHGDGRA ADEYSRLAPT
FKARLSKTEL RIGELQPNLP VLTFSDIRLL PPTYQGASLS SSEIDGLTLQ AGHLKSTHLR
NEGGDGKMNA MLGHVPMRQA ESDAFNYVGG DYAFNANQSS VSLWYGQLED IYEQGFVGLK
HSKPVGDWVL SANLGYFTAR EDGDALLGNI DNQAFFSMFT ARHGGHSFHV GYQGIYGDSP
FPRVFANISP LGNEVPTYEF AYTDERSYQV RYDYNFAAMG VPGLTATVRY ITGNNVDTGL
GYEGRDRERD LDIGYAVQSG VLKGLGIRVR NAMARSNYRS DIDENRLTLV YTWQLF
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