Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_2662 |
Symbol | |
ID | 5870450 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | + |
Start bp | 2979933 |
End bp | 2981549 |
Gene Length | 1617 bp |
Protein Length | 538 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641547783 |
Product | ABC transporter related |
Protein accession | YP_001668895 |
Protein GI | 167033664 |
COG category | [R] General function prediction only |
COG ID | [COG1123] ATPase components of various ABC-type transport systems, contain duplicated ATPase |
TIGRFAM ID | [TIGR02323] phosphonate C-P lyase system protein PhnK |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACACCC CATTGGTGCG TATCCAGCAG TTAAGCGTCG ATTATCCAGG CAACCCGCAA GCCGCCGTAC AGGCGCTGGA CCTGGAAATT GCCGCAGGTG AAATTGTCTG CCTGGTGGGC GAGTCCGGTT CGGGCAAATC CACTACCGCT GCGGCCCTCG CCGGGCTGCT GCCAGCCGCG GCGCGGCAGC GAGGCCAACT GTGGCTGCAA GGCCAGGCGC TGGAACAATT TGCTGAACGT GACTGGTGCC AACGCCGTGG CCGCCTGGTC GGCTTCGTGC CACAAGACCC CGGCACCTCG CTGGACCCGG TCAAGACCAT CGGTGCACAG CTGGTCGAAG CCATGACCGT GCATGGCGTG CCGGGCCGTG AAGCCGGTGC GCGCGGGCTG GCACTGCTGC AGCAGGTGGG CCTCAGGGAT GCCAAGCAAC TGTCCCGCCG CTACCCCCAT GAGCTGTCGG GTGGCATGTG CCAGCGGGTG TTGATCGCAA TCGCCTTGGC CAATGACCCA CCGCTGTTGA TCGCCGACGA ACCCACCAGC GCCCTGGATG TCAGCGTGCA GCGGCAAATT CTAGACCGCC TGCAGCAACT GGTGCGCGCA CGCGGCAGCA GCTTGTTGCT CATCACCCAT GACCTGGCGG TGGCGCTGGA CCGTGCCGAT CGCATTCTGG TGATGCGCAA CGGCCAACTG CTGGAGAGCG GCACGCCCGC GCAGTTATGG CATGCACCCA AGCATCCCTA CACGCGGCAG CTGCTGGCGG CCTCACCGTT GGCACGCCTG CAGCAACGGC GTACTGGCCC AGCCAGCGCA GTTGGCGAAC CCCTGTTGCA GGTCAGTGGC CTGATGCGGC GTTTCAACCG GCATGCCGCG CCGGTGGTCG ACGGTGTCAG CTTCACCCTG CCCCGTGGCA GTACCACCAG CCTGGTGGGC GAGTCAGGTT CGGGTAAGTC CACCACTGCC CGCATCATCC TGGCCTTGGA GCAAGCCAGT GCAGGCAGCG TGTTGTTCGA CGGCCAGCCA ATACTGGGCG CCAGCCGGCG CCAATTGCAT GCCTACCGGC GGCGAGTGCA ACTGGTCTAC CAGAACCCCT GGGCTGCGTT GGACCCTAGG CACAACCTGC TGCAGATCGT CAGTGAGCCG ATGCGCGCCT TTGCCATTGG CGCGCGACGA GACGATCGGC AGCGGGTGCT GGGTTTGCTG GAGCGGGTCG GGTTACCCGC CGAGTTGCTG CTGCGTCGGC CTGGAGCGTT GTCTGGTGGG CAGCGCCAGC GTGTGGCTAT CGCTCGTGCC TTGGCGGCTG AACCGGAGCT GCTGGTGCTC GATGAGCCGC TGTCGGCCCT GGATGCGCCC GTGCAGGCAC AGGTGTTGGC GTTGTTGCAG CGTTTGCAGG CTGAGCTGGG GCTGACCTAC CTGTTCATTT CTCACGACCT GGCGACGGTG CGCGGCATCA GCGATCAGGT GCTGGTGATG CGCCAGGGGC GGCTGGTGGA CCAAGGGCCG ACCGAGCAGG TGTTCGAGCG GCCCGCGAGT GACTACACGC GGAGCTTGCT GGAGGATATG CCAGGATTGG GCCGGGTATT GCAGGGGGAG CGGCCCTTGG TGCGTGAGGT GGGGTGA
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Protein sequence | MNTPLVRIQQ LSVDYPGNPQ AAVQALDLEI AAGEIVCLVG ESGSGKSTTA AALAGLLPAA ARQRGQLWLQ GQALEQFAER DWCQRRGRLV GFVPQDPGTS LDPVKTIGAQ LVEAMTVHGV PGREAGARGL ALLQQVGLRD AKQLSRRYPH ELSGGMCQRV LIAIALANDP PLLIADEPTS ALDVSVQRQI LDRLQQLVRA RGSSLLLITH DLAVALDRAD RILVMRNGQL LESGTPAQLW HAPKHPYTRQ LLAASPLARL QQRRTGPASA VGEPLLQVSG LMRRFNRHAA PVVDGVSFTL PRGSTTSLVG ESGSGKSTTA RIILALEQAS AGSVLFDGQP ILGASRRQLH AYRRRVQLVY QNPWAALDPR HNLLQIVSEP MRAFAIGARR DDRQRVLGLL ERVGLPAELL LRRPGALSGG QRQRVAIARA LAAEPELLVL DEPLSALDAP VQAQVLALLQ RLQAELGLTY LFISHDLATV RGISDQVLVM RQGRLVDQGP TEQVFERPAS DYTRSLLEDM PGLGRVLQGE RPLVREVG
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