Gene PputGB1_2662 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_2662 
Symbol 
ID5870450 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp2979933 
End bp2981549 
Gene Length1617 bp 
Protein Length538 aa 
Translation table11 
GC content66% 
IMG OID641547783 
ProductABC transporter related 
Protein accessionYP_001668895 
Protein GI167033664 
COG category[R] General function prediction only 
COG ID[COG1123] ATPase components of various ABC-type transport systems, contain duplicated ATPase 
TIGRFAM ID[TIGR02323] phosphonate C-P lyase system protein PhnK 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACACCC CATTGGTGCG TATCCAGCAG TTAAGCGTCG ATTATCCAGG CAACCCGCAA 
GCCGCCGTAC AGGCGCTGGA CCTGGAAATT GCCGCAGGTG AAATTGTCTG CCTGGTGGGC
GAGTCCGGTT CGGGCAAATC CACTACCGCT GCGGCCCTCG CCGGGCTGCT GCCAGCCGCG
GCGCGGCAGC GAGGCCAACT GTGGCTGCAA GGCCAGGCGC TGGAACAATT TGCTGAACGT
GACTGGTGCC AACGCCGTGG CCGCCTGGTC GGCTTCGTGC CACAAGACCC CGGCACCTCG
CTGGACCCGG TCAAGACCAT CGGTGCACAG CTGGTCGAAG CCATGACCGT GCATGGCGTG
CCGGGCCGTG AAGCCGGTGC GCGCGGGCTG GCACTGCTGC AGCAGGTGGG CCTCAGGGAT
GCCAAGCAAC TGTCCCGCCG CTACCCCCAT GAGCTGTCGG GTGGCATGTG CCAGCGGGTG
TTGATCGCAA TCGCCTTGGC CAATGACCCA CCGCTGTTGA TCGCCGACGA ACCCACCAGC
GCCCTGGATG TCAGCGTGCA GCGGCAAATT CTAGACCGCC TGCAGCAACT GGTGCGCGCA
CGCGGCAGCA GCTTGTTGCT CATCACCCAT GACCTGGCGG TGGCGCTGGA CCGTGCCGAT
CGCATTCTGG TGATGCGCAA CGGCCAACTG CTGGAGAGCG GCACGCCCGC GCAGTTATGG
CATGCACCCA AGCATCCCTA CACGCGGCAG CTGCTGGCGG CCTCACCGTT GGCACGCCTG
CAGCAACGGC GTACTGGCCC AGCCAGCGCA GTTGGCGAAC CCCTGTTGCA GGTCAGTGGC
CTGATGCGGC GTTTCAACCG GCATGCCGCG CCGGTGGTCG ACGGTGTCAG CTTCACCCTG
CCCCGTGGCA GTACCACCAG CCTGGTGGGC GAGTCAGGTT CGGGTAAGTC CACCACTGCC
CGCATCATCC TGGCCTTGGA GCAAGCCAGT GCAGGCAGCG TGTTGTTCGA CGGCCAGCCA
ATACTGGGCG CCAGCCGGCG CCAATTGCAT GCCTACCGGC GGCGAGTGCA ACTGGTCTAC
CAGAACCCCT GGGCTGCGTT GGACCCTAGG CACAACCTGC TGCAGATCGT CAGTGAGCCG
ATGCGCGCCT TTGCCATTGG CGCGCGACGA GACGATCGGC AGCGGGTGCT GGGTTTGCTG
GAGCGGGTCG GGTTACCCGC CGAGTTGCTG CTGCGTCGGC CTGGAGCGTT GTCTGGTGGG
CAGCGCCAGC GTGTGGCTAT CGCTCGTGCC TTGGCGGCTG AACCGGAGCT GCTGGTGCTC
GATGAGCCGC TGTCGGCCCT GGATGCGCCC GTGCAGGCAC AGGTGTTGGC GTTGTTGCAG
CGTTTGCAGG CTGAGCTGGG GCTGACCTAC CTGTTCATTT CTCACGACCT GGCGACGGTG
CGCGGCATCA GCGATCAGGT GCTGGTGATG CGCCAGGGGC GGCTGGTGGA CCAAGGGCCG
ACCGAGCAGG TGTTCGAGCG GCCCGCGAGT GACTACACGC GGAGCTTGCT GGAGGATATG
CCAGGATTGG GCCGGGTATT GCAGGGGGAG CGGCCCTTGG TGCGTGAGGT GGGGTGA
 
Protein sequence
MNTPLVRIQQ LSVDYPGNPQ AAVQALDLEI AAGEIVCLVG ESGSGKSTTA AALAGLLPAA 
ARQRGQLWLQ GQALEQFAER DWCQRRGRLV GFVPQDPGTS LDPVKTIGAQ LVEAMTVHGV
PGREAGARGL ALLQQVGLRD AKQLSRRYPH ELSGGMCQRV LIAIALANDP PLLIADEPTS
ALDVSVQRQI LDRLQQLVRA RGSSLLLITH DLAVALDRAD RILVMRNGQL LESGTPAQLW
HAPKHPYTRQ LLAASPLARL QQRRTGPASA VGEPLLQVSG LMRRFNRHAA PVVDGVSFTL
PRGSTTSLVG ESGSGKSTTA RIILALEQAS AGSVLFDGQP ILGASRRQLH AYRRRVQLVY
QNPWAALDPR HNLLQIVSEP MRAFAIGARR DDRQRVLGLL ERVGLPAELL LRRPGALSGG
QRQRVAIARA LAAEPELLVL DEPLSALDAP VQAQVLALLQ RLQAELGLTY LFISHDLATV
RGISDQVLVM RQGRLVDQGP TEQVFERPAS DYTRSLLEDM PGLGRVLQGE RPLVREVG