| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_2657 |
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| Symbol | |
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| ID | 5870445 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 2972719 |
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| End bp | 2975154 |
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| Gene Length | 2436 bp |
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| Protein Length | 811 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641547778 |
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| Product | TonB-dependent receptor plug |
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| Protein accession | YP_001668890 |
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| Protein GI | 167033659 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4771] Outer membrane receptor for ferrienterochelin and colicins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0512157 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 0.824086 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGTCTG TGTTTACCCC TTTAACGCTG GCCCCCGCCT TGCTCGCCGG CTACCTGCTC
ATCCCGCTGG CCATGGCGGC CGAGGCTGAC GCTGCACTCG ACACGGTGAT CGTCACCGGC
TCGCGGGGCA GCGATGTGCG TACCGTCACC AGTAGCCCGG CACCGATCGA CGTGATCGAC
AGCAAGCAGT TGGAACAGAC TGGCGAATCC AGCCTGCGCG GTGCGCTGCA GAAAACCTTG
CCATCGTTCT CCCAACGCCC TTCCGGTACG TCCAATGACA GCGTCGCCCG CCCCTACAGC
CTGCGCGGTC TGAACGGTTC CAACGTGCTG GTGCTGGTCA ACGGCAAGCG CCGCCACAAC
AGTGCCGTGA TCAACCTCGA CTCCACCGCC GCCTACGGCA CCAACCCCGT CGACCTCGAC
ATGATCCCCA TCAGCGCCAT CGACCACGTC GAGATATTGC GTGATGGTGC CTCGGCGCAG
TATGGCTCCG ATGCCATCGC CGGGGTGATC AACATCATCC TCAAGCAGCG CGACAACGGT
GGTTCGGTCA GCACCCAGTA CGGCCAGTAC TACAAGGGCG ATGGCGATAA CCTGCGGCAA
ACCCTCAACC AGGGCCTGGC CCTGGGCGAC AACGGCGGCT TCTTCAACTA CGCCCTGGAC
GCCAAGTCGG TACAGACTGC CACCCGCTCG CGCGAGGCCA CCGGCAACCT GTACTTCGCC
GGCGACCCAC GCAACGACAG CGCCGACCGC CATGTGCAGA AGAATGGCCT GCCAAAGATC
AAGGCCATCA ACCTGTCCTA CAACGCCGAG CTGCCCGTCA ATGACGCCCT GACTCTTTAC
TCGTTCTCCA CGTTCAGCAA ACGCGATGCC CGTGGCGGGC AAAACTACCG CCGCCCGAAC
TCGACCAACA TCATCCCCGA GATCTACCCG GACGGTACTG CGCCCTTCTA TACCCTGGAA
GAAACCGACT ACCAGGCTGC CGCCGGCGGC CGTGGCGAGC TGGGCGAATG GCACTGGGAC
CTGAGCTCTA CCTTTGGCCG TGACAAGGGC CAGGCCGGTG CCGACGAAAC CCTTAACGCC
TCGCTCGGCC CGACCAGCCC GACGCGCTTC GACACTTACA CCAACTACTT CGACCAGTGG
ACCAACAACC TCGACCTGAC TCGCGCCTTC GAGGTTGGCC TGGCCAAGCC GCTGCAGGTG
TCGTGGGGCC TGGAGCATCG TCATGAGCGC TACAAGACCG AGTCCGATGA CCCGCTTTCG
TACATCAATG GCGGTTACAT CTACCCCAGT GGCCCACTGG CTGGCCAGCC GGGTGCAGTC
GGCGCCCAGG GCGCAATCAC CCTGACCCCC GAAGACGAAG GCCAGCTCAG CCGCAACAGC
TACGCCAGCT ACCTCGACCT GGGCCTGAAC CCCACCGACA AACTGTGGCT GGGGATGGCC
GCGCGTTTCG AGAAGTACGA CGACAGCAGC GGCAACACAC GCAGCGGCAA GCTTTCCGCA
CGCTACGACT TCACCTCCAC CTTCGCCGTG CGCGGCACCC TCAGCAACGG CTTTCGCGCA
CCATCGCTGT CGCAGTCGGT CTACGCCCAG ACGTCCAACC AGTACACCCT CGTCAATGGC
GTGGCGCAGT TCGTCGAGGC CAAGACCGTG CGTGTCGATT CGCCACTGGC CCAGGCACTG
GGGGCTGAAG ACCTTAGCCC GGAGAAATCG CGCAACATCA GCATCGGCTT TACCTGGCAG
CCTCTGCCCC AGGCCAGCCT GACCCTGGAT GCCTACCAGA TCGAAATCCG CGATCGCATT
GCCCTCACCG GCTTCCTCTA TGGCAACGGC GTCGACCAGG TACTGCTCGA CAACGGCTAC
AGGCCCGGAT ACCGGGTCAA GTACTTCACC AACGCCGCCG ACACCACCAC CCGCGGGGTC
GACCTGGTGG CCGACTACCG CGTCGACTAC GGCCGCTATG GCCGGGCCAA GTACGGCGTG
GGTTTCAACT ACAACAAGAC CGAGATCGAC GACATCAAGG AGACGCCGGC ATCGTTGCGG
GCTGCGGGCA ATAACCTGGA ACTGTTCGAC CGCGTGGCAC AGGGCTACCT GACCGTTGCC
AACCCCAAGA CCAAATTGAT CCTCAGCGCC AACTGGCAGA TCGAACGTTT CACCATCAAT
GCTGCACTGA CCCGCTACGA CAAGGTCATC GCCCGTGACG CCAACCCTGA CTATGACGTG
ACCTACGGCG CGAAATGGCT CACTGACCTG GAAGTGGCCT ATGCCCTGAC CGACAACTTC
GACATCGCCG TAGGTGCCAA CAACCTGTTC GATGTACGCG CCGACAACAA CGGCTACCCC
GCGGGCGACA TCAACGGCTT CCCGAAATTT GGCTCGATCT CGCCGTTCGA CCCTTACGGC
GGCTTCTGGT ACACGCGCAT CGCCTACAAC TTCTGA
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| Protein sequence | MKSVFTPLTL APALLAGYLL IPLAMAAEAD AALDTVIVTG SRGSDVRTVT SSPAPIDVID
SKQLEQTGES SLRGALQKTL PSFSQRPSGT SNDSVARPYS LRGLNGSNVL VLVNGKRRHN
SAVINLDSTA AYGTNPVDLD MIPISAIDHV EILRDGASAQ YGSDAIAGVI NIILKQRDNG
GSVSTQYGQY YKGDGDNLRQ TLNQGLALGD NGGFFNYALD AKSVQTATRS REATGNLYFA
GDPRNDSADR HVQKNGLPKI KAINLSYNAE LPVNDALTLY SFSTFSKRDA RGGQNYRRPN
STNIIPEIYP DGTAPFYTLE ETDYQAAAGG RGELGEWHWD LSSTFGRDKG QAGADETLNA
SLGPTSPTRF DTYTNYFDQW TNNLDLTRAF EVGLAKPLQV SWGLEHRHER YKTESDDPLS
YINGGYIYPS GPLAGQPGAV GAQGAITLTP EDEGQLSRNS YASYLDLGLN PTDKLWLGMA
ARFEKYDDSS GNTRSGKLSA RYDFTSTFAV RGTLSNGFRA PSLSQSVYAQ TSNQYTLVNG
VAQFVEAKTV RVDSPLAQAL GAEDLSPEKS RNISIGFTWQ PLPQASLTLD AYQIEIRDRI
ALTGFLYGNG VDQVLLDNGY RPGYRVKYFT NAADTTTRGV DLVADYRVDY GRYGRAKYGV
GFNYNKTEID DIKETPASLR AAGNNLELFD RVAQGYLTVA NPKTKLILSA NWQIERFTIN
AALTRYDKVI ARDANPDYDV TYGAKWLTDL EVAYALTDNF DIAVGANNLF DVRADNNGYP
AGDINGFPKF GSISPFDPYG GFWYTRIAYN F
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