| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_2624 |
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| Symbol | |
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| ID | 5870413 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 2941023 |
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| End bp | 2942585 |
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| Gene Length | 1563 bp |
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| Protein Length | 520 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641547747 |
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| Product | acetate permease |
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| Protein accession | YP_001668859 |
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| Protein GI | 167033628 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4147] Predicted symporter |
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| TIGRFAM ID | [TIGR00813] transporter, SSS family |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.332014 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 0.410104 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACTGGA CCGCCATTTC GATGTTCATG GTGTTCGTCT GCTTCACGCT GATGGTCACC
CGCTGGGCTG CCATGCGCAC CCGCTCAGCC AGCGACTTCT ACACCGCTGG CGGGGGGCTG
ACCGGTATGC AGAACGGCCT GGCGATCGCC GGTGACATGA TCAGCGCCGC GTCGTTCCTG
GGTATTTCCG CGATGATGTT CATTAACGGC TACGACGGCC TGCTGTATGC CCTGGGCGTA
CTGGCCGGTT GGCCGATCAT CCTGTTCCTG ATTGCAGAGC GCCTGCGCAA CCTGGGCAAG
TACACTTTCG CCGACGTGGT CAGCTACCGC CTGGCGCAAA CCCCGGTGCG CCTGACCTCG
GCCTTTGGCA CCCTGGTGGT GGCGTTGATG TACCTGGTGG CGCAGATGGT CGGCGCCGGC
AAGCTGATCG AGCTGCTGTT CGGTATCAGC TACCTGTACG CCGTGATGCT GGTCGGTGTG
CTGATGGTCG CCTATGTCAC CTTCGGCGGC ATGCTCGCCA CCACCTGGGT GCAGATCATC
AAGGCCGTAA TGCTGCTGTC GGGCACCAGC TTCATGGCTT TCATGGTGCT CAAGCACTTT
GGTTTCAGCA CCGAAGCGAT GTTTGCCAGC GCCGTGGCCG TGCATGCCAA GGGCCAGGCG
ATCATGGCCC CGGGCGGCTT GCTGTCAAAC CCAGTGGACG CGATTTCTCT CGGTTTAGGC
ATGATGTTCG GCACCGCCGG CCTGCCGCAT ATTCTGATGC GCTTCTTCAC CGTCAGTGAT
GCCAAGGAAG CACGCAAGAG CGTGTTCTAC GCCACTGGCT TCATCGGTTA CTTCTACCTG
CTGCTGATCA TTGTCGGCTT TGGCGCCATC GTGATGGTTG GCACCGAGCC GTCCTACCGC
GATGCCACCG GCGCCATCAT CGGCGGCGGC AACATGGTCG CCGTGCACTT GGCCCAGGCC
GTGGGTGGCA ACCTGTTCCT CGGCTTCATC TCTGCCGTGG CTTTCGCCAC CATCCTGGCC
GTGGTCGCCG GCCTGGCGCT GTCCGGGGCA TCGGCGGTCT CCCACGATCT GTATGCCTGC
GTGATGCGCA AAGGCAAGGC GACCGAGCAA CAGGAAATGC GCGTGTCGCG TGTTGCCACG
CTGGTCATCG GCCTGCTTGC GGTGATCCTC GGCCTGATGT TCGAGTCGCA GAACATCGCC
TTCCTCTCCG GCCTGGTGCT GGCGGTGGCC GCCTCGGTCA ACTTCCCGGT GCTGCTGCTC
TCGATGTTCT GGAAAGGCCT GACCACCCGC GGCGCGGTGT GCGGCAGCAT GGCCGGCCTG
GTCTCGGCGG TGCTGTTGGT CGTGCTGGGC CCAGCAGTGT GGGTCAACGT GTTGCACAAC
GAGACGGCGC TGTTCCCCTA CAGTAACCCG GCACTGTTCT CCATGAGCCT GGCCTTCCTC
AGTGCCTGGG TGTTCTCGGT TACCGACAGC TCCGAACGTG CCGTCGAGGA ACGTGGCCGC
TACCTGGGCC AGTTCATCCG CTCCATGACC GGCATCGGCG CTGCCGGCGC CAGCAAGCAC
TGA
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| Protein sequence | MNWTAISMFM VFVCFTLMVT RWAAMRTRSA SDFYTAGGGL TGMQNGLAIA GDMISAASFL
GISAMMFING YDGLLYALGV LAGWPIILFL IAERLRNLGK YTFADVVSYR LAQTPVRLTS
AFGTLVVALM YLVAQMVGAG KLIELLFGIS YLYAVMLVGV LMVAYVTFGG MLATTWVQII
KAVMLLSGTS FMAFMVLKHF GFSTEAMFAS AVAVHAKGQA IMAPGGLLSN PVDAISLGLG
MMFGTAGLPH ILMRFFTVSD AKEARKSVFY ATGFIGYFYL LLIIVGFGAI VMVGTEPSYR
DATGAIIGGG NMVAVHLAQA VGGNLFLGFI SAVAFATILA VVAGLALSGA SAVSHDLYAC
VMRKGKATEQ QEMRVSRVAT LVIGLLAVIL GLMFESQNIA FLSGLVLAVA ASVNFPVLLL
SMFWKGLTTR GAVCGSMAGL VSAVLLVVLG PAVWVNVLHN ETALFPYSNP ALFSMSLAFL
SAWVFSVTDS SERAVEERGR YLGQFIRSMT GIGAAGASKH
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