Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_2617 |
Symbol | |
ID | 5870406 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | + |
Start bp | 2935348 |
End bp | 2936667 |
Gene Length | 1320 bp |
Protein Length | 439 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 641547740 |
Product | phenylacetate-CoA ligase |
Protein accession | YP_001668852 |
Protein GI | 167033621 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG1541] Coenzyme F390 synthetase |
TIGRFAM ID | [TIGR02155] phenylacetate-CoA ligase |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.179563 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 0.174416 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATATGT ACCATGATGC CGATCGTGCC CTGCTGGACC CGATGGAAAC CGCCAGCGTC GACGCCCTGC GCCAGCATCA GCTGGAGCGT TTGCGCTGGA GCCTGAAGCA CGCCTATGAC AACGTGCCGC TGTACCGTCA GCGCTTTGCC GAGTGCGGCG CCCACCCCGA TGACCTCAAG TGCCTTGAAG ATCTGGCGAA GTTCCCCTTC ACCGGCAAGA ACGACCTGCG CGACAACTAC CCCTACGGCA TGTTCGCAGT GCCGCAGGAA GACGTGGTGC GCTTGCATGC CTCCAGTGGC ACCACCGGCA AGCCGACGGT GGTCGGCTAC ACCCAGAACG ACATCGACAC CTGGGCCAAT GTGGTCGCCC GCTCGATCCG TGCCGGTGGC GGGCGCAAAG GCGACAAGGT ACATGTTTCC TACGGCTATG GCCTGTTCAC CGGTGGGCTT GGTGCACACT ACGGCGCCGA GCGCCTGGGC TGTACAGTCA TCCCCATGTC CGGCGGCCAG ACCGAGAAGC AGGTGCAGCT GATTCGCGAC TTCCAGCCCG ATATCATCAT GGTCACCCCA TCCTACATGC TCAACCTGGC CGACGAGATC GAGCGCCAGG GCATCGACCC GCACGACCTC AAGCTGCGCC TGGGCATTTT CGGTGCCGAG CCCTGGACCG ATGAACTGCG CCGCTCGATC GAGCAGCGTC TGGGTATCAA CGCCCTCGAT ATCTATGGCT TGTCGGAGAT CATGGGCCCA GGGGTGGCGA TGGAATGCAT CGAGACCAAG GACGGCCCGA CCATCTGGGA AGACCACTTC TACCCCGAAA TCATCGACCC AGTCACCGGC GAAGTGTTGC CGGACGGCCA GCTGGGCGAG CTGGTGTTTA CCTCACTGAG CAAGGAAGCG CTGCCGATGG TGCGCTACCG CACCCGTGAC CTTACCCGTC TGCTGCCCGG CACCGCCCGG CCCATGCGCA GAATCGGCAA GATCACCGGC CGCAGTGACG ACATGCTGAT CATTCGCGGG GTCAACGTGT TCCCCACGCA GATCGAGGAG CAGGTATTAA AAATAAAACA GCTTTCAGAG CTTTATGAGA TTCATCTGTA TCGCAATGGC AACCTGGACA GTGTCGAGGT GCATGTGGAG TTGCGTGCGG AGTGCCAGCA CCTCGATGAA GGCCAGCGCA AGCTGGTTAT CGGGGAATTG AGCAAACAGA TCAAGACCTA CATCGGCATC AGCACCCAGG TGCACCTGCA ACCCTGCGGC ACGCTCAAGC GCTCAGAAGG CAAGGCGTGC CACGTGTTCG ACAAACGGTT GGCCAGCTGA
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Protein sequence | MNMYHDADRA LLDPMETASV DALRQHQLER LRWSLKHAYD NVPLYRQRFA ECGAHPDDLK CLEDLAKFPF TGKNDLRDNY PYGMFAVPQE DVVRLHASSG TTGKPTVVGY TQNDIDTWAN VVARSIRAGG GRKGDKVHVS YGYGLFTGGL GAHYGAERLG CTVIPMSGGQ TEKQVQLIRD FQPDIIMVTP SYMLNLADEI ERQGIDPHDL KLRLGIFGAE PWTDELRRSI EQRLGINALD IYGLSEIMGP GVAMECIETK DGPTIWEDHF YPEIIDPVTG EVLPDGQLGE LVFTSLSKEA LPMVRYRTRD LTRLLPGTAR PMRRIGKITG RSDDMLIIRG VNVFPTQIEE QVLKIKQLSE LYEIHLYRNG NLDSVEVHVE LRAECQHLDE GQRKLVIGEL SKQIKTYIGI STQVHLQPCG TLKRSEGKAC HVFDKRLAS
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