| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_2587 |
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| Symbol | |
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| ID | 5870376 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 2906976 |
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| End bp | 2908298 |
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| Gene Length | 1323 bp |
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| Protein Length | 440 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 641547710 |
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| Product | amino acid permease-associated region |
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| Protein accession | YP_001668822 |
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| Protein GI | 167033591 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0531] Amino acid transporters |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.250393 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCACAC TCAAGCGAAC ACTTTCGCTG GGTTCGGTGG TGCTTTTCGG CATCGCCTAC
ATGACCCCGA TCATCGTCCT TGGCACCTTT GGCATTCTGG CGGATACCAC CGCAGGGATG
GTGCCCGCAG CCTACCTTGC GGCCGCCATC GCCATGCTGT TCACCGCCTT GAGCTATGGC
AACATGGCGC GCGCCTTCCC GGTTGCCGGG TCCGCCTATA CCTACGTACG CAAGTCGATC
AGCCCGCAAC TGGGCTTCAT CACCGGTTGG GCGGTGCTGC TCGACTACCT GTTCCTGCCC
ATGGCGATCT GGCTGATTGG TGCCGCCTAC CTGCACTCGG CTTTCCCCAG TGTGCCGCAG
GCCATCTGGG TTCTGGCGTT CATCGCTGTG ACCACCACCA TCAATGTGAT TGGCCTGCGC
CTGGCGAAAA CCGTAAACGG CCTGCTGATG CTCATTCAGC TTCTGGTGCT GGCGGCGTTT
GTCGCCCTCG CCGTGCACTA CGTGTGGGGT GATCCCACGG TACCGCTATG GACCCTCGAG
CCCTTCTACA AGGAAGGTGC CCAGTTGCCG CTGATCATGA GCGGTGCCGC GATCGCCTGT
TACTCCTTCC TCGGCTTCGA TGCCGTCAGT ACCCTGACTG AAGAGACCAA GGAGCCACGC
AAGAACATCC CAAGGGCCAT CCTGCTGATC ACCCTGATTG GCGGCGGTCT GTTCATCGCC
TGCAGCTACT TCGTGCAGCT GGCCCACCCG TCTACCGACT TCATCAACGC AGATGCGGCA
GCCTATGAAA TCGCCCAGAA CATCGGCGGC GACCTGTTCG TGAGCGTTTT CCTGCTGGGG
CTGATCGTTG GCCAGTTCAC CTCTGGCCTG TCGGCTCAAG CCAGCGCCTC CCGGCTGCTG
TATGCAATGG GCCGTGACGG TGTGTTGCCC AAGTCGTTCT TTGGCAAGCT GAGCGAGCGC
TTCAGCACAC CAGTGCCCAG TATCATCCTG TGCGGGGTCG TCGCCCTGCT CGCCTTGCGC
ATGGATGTGA CCACGTCCAC TTCGTTCATC AACTTCGGCG CCTTCCTGGC CTTCAGCCTG
GTCAACCTGG CGGTCATCTT CCATTACTGG CTGGCCATGG GGCAACGCGG CGGCACAGCC
GTACTTCTAT ACCTGGCATT CCCACTGGTG GGCTTGGTGT CCAACGTGTG GCTGATGGCA
AGCCTGGATC ACCTGGCAAT CTACCTGGGG CTGGGATGGT TGTGCCTGGG CATGCTTTAC
CTGACCGCAA TTACCCGCGG TTTCAGCAAG CAGCCCCCCG AGATGCATTT CGAAGAAGCG
TAG
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| Protein sequence | MATLKRTLSL GSVVLFGIAY MTPIIVLGTF GILADTTAGM VPAAYLAAAI AMLFTALSYG
NMARAFPVAG SAYTYVRKSI SPQLGFITGW AVLLDYLFLP MAIWLIGAAY LHSAFPSVPQ
AIWVLAFIAV TTTINVIGLR LAKTVNGLLM LIQLLVLAAF VALAVHYVWG DPTVPLWTLE
PFYKEGAQLP LIMSGAAIAC YSFLGFDAVS TLTEETKEPR KNIPRAILLI TLIGGGLFIA
CSYFVQLAHP STDFINADAA AYEIAQNIGG DLFVSVFLLG LIVGQFTSGL SAQASASRLL
YAMGRDGVLP KSFFGKLSER FSTPVPSIIL CGVVALLALR MDVTTSTSFI NFGAFLAFSL
VNLAVIFHYW LAMGQRGGTA VLLYLAFPLV GLVSNVWLMA SLDHLAIYLG LGWLCLGMLY
LTAITRGFSK QPPEMHFEEA
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