| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_2586 |
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| Symbol | |
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| ID | 5870375 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 2904273 |
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| End bp | 2906816 |
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| Gene Length | 2544 bp |
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| Protein Length | 847 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641547709 |
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| Product | response regulator receiver modulated GAF sensor protein |
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| Protein accession | YP_001668821 |
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| Protein GI | 167033590 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4251] Bacteriophytochrome (light-regulated signal transduction histidine kinase) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.251983 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCTTCA ACCCCCAAGT AAACCTGACC AACTGCGACC GCGAGCCCAT CCAGACGCCC
GGCAGCATCC AACCCCACGG CTGCCTGCTG GCCTGTGATG CATCGGCGAC CGTGGTCCTG
CGCCATTCAG TCAACGCCCC GGATGTGCTT GGCATAACAG GCGATATCAA CGGCCAGAAG
CTGCAAGCGG TGCTAGGGGA CGAGGTAGCC CACACCTTGC GCAACGCGTT GGCCCGTACT
CGCGAAGCCT CGCGCCCTGC ACTCAGCTTC AGCGTTAGGC TGCCTAACGG CCAGGCTTTC
GATGTCGCCG CCCACCTGTT CAAAGGCACT GCGATCCTGG AGTTCGAACC GGCCGGCGCC
AGCATCGCCG AGCCTATTGA ACTGGCGCGA ACCCTGATTG CCCAGCTGCG CGAAATCGAA
CAAACCAGCA AATTGTTCCG CGACGCCGCC CGCTTTGTCC GGGCAGTGCT TGGCTATGAC
CGGGTGATGA TCTACCAGCT AGGCACCGAC GGTGCCGGCA AGGTGGTCGC AGAGGCCAGG
CGCAGCGACC TCGAAAGCTT CATGGGCCAG TACTTTCCCG CGTCCGACAT CCCGCAGCAG
GCCCGTGCGC TTTATCTGCG CAACCCGATC CGGGTCATTT CCGACGCCCA GTTCAAAACG
GTGGCCATCG AGCCTGTCCT CGATCCGTCA GGCGAACCGC TCGACCTGTC CTACGCGCAC
CTGCGCAGCG TGTCGCCGAT CCATTGCGAG TACCTGTGCA ACATGGGCGT GGGCGCCTCG
ATGTCGATAT CGGTGATCGT CAACGGCGAA CTGTGGGGGA TGATCGCCTG CCACCACTAT
GCACCCCGCA CGCTGGCCAT GGGGCAGCGG GTAGCCGCGG AGATGTTCGG CGAGTTCTTC
TCCCTGCACA TCGAGACCTT GCGCAGCCGG CAGAAGCTCG AAGCTGCCGT GCAGGTTCAC
AAAGCGCTGG ACAGCATGCT GCGCGACGCC AACCAGACCG CTGACATCGA TTCGTTCTTC
CACGCACGCC TGCCACGGTT GATGTCGCTG ATCCCCTGCG ATGGCATCGG CATGTCGCTA
CAAGGCCGCT GGTCAACCGT CGGCCTGGCG CCGCCTAAAA CGGCCGTCCC CGATTTGCTG
CGCCTGGCAG ACATGGTCAG CGAAGGCCGG ACCTGGGCGT CCAACCGTCT GTCGATGGTA
TTACCTTCAG CCCAGGCATA CTTCACCGAA GTATCGGGCG TCCTGATCAT CCCGATGTCG
CAGCAGCCGA GGGACTACCT GATCTTCTTC CGCAAGGAGG TGGTCGAGAC GCTCGACTGG
GCCGGGGACC CGAACAAGAC CTACGACAGC GGCTTGCTGG GCGACCGCCT GACACCCCGC
AAAAGCTTTG CCATCTGGAA AGAAACCGTT CACCAGCAGT CGCTGCCCTG GACCGAACAG
GACCGCCAGT TTGGCGACTC CATCCGTACC GCCATCGTCG AAGTGGTGCT GTACAACAGC
GAACTACTGG CCAGCGAGCG CACGAAGGCG GAAGTGCGCC AGCGCATCCT CAACGAAGAA
CTCAATCATC GGGTCAAGAA CATTCTGTCG TTGATCGGCG CTCTGGTTGC CCACCCGACC
TCGGAAAGCC AGACACTGCA GGACTACGTG GCGACACTGA AGGGGCGCAT CCAGGCGTTG
TCTCTCGCTC ACGATCAAGT GGTACGTGGT GATGGTGGCG GGCGACTGGC CAAGCTGCTG
GAGGCAGAGC TTTCACCCTA CCGCACCGCC GCTGGGGTGA TCGAGCTGCA GGGCCCGAAT
GTTACCCTTG ATGCCCGCGC CTATTCGGTC ATGGCTTTGG TGCTGCACGA GCTGGCAACC
AATGCCGCCA AATACGGCGC GCTGTCGCGG GCTGGCGGCA AGCTTGCAGT GAGCTGGGCC
ATCGACGCTA CCAACGCCTG CGCCATCAGT TGGCGTGAAA GCGGCGGGCC AACGGTTCGG
CCACCTACCC GCAATGGCTT TGGCTCGGTG CTGATCGACC GCAGTATCCC GTTCGACCTT
GGCGGCACGA GCGCGGTGGA GTATCACGCC GAAGGCCTGC AAGGGTTGTT CAAGATTCCT
GCAATGCACC TTTCCGTGGC CGAGGCTGCC GAACCCGCGA GCCTGGCTGC GCCCATCGCA
CGTGCCAAGG ATATCTTCGC AGCGCAAACA GGGCTGAGTG TGCTGATCCT CGAAGACCAG
CTGGTGATCG CGATTGGCCT GGAACAGATT CTCAACGATG CGCAGATCAA GGACGTGATC
ACCGCCAGCT CCGAAGATGA AGCCTTGCGC TTGATTGCCA GTCGCACACC GGATGCCGCG
ATATTGGATG TCAACCTGGG CACTGGCACA TCCATTTCTG TGGCCGATGA ACTGGTGCGT
CGGCAGATTC CGTTCCTGTT CGCCACCGGC TATGGCGACA GCATCAGCAT TCCCGAGCAC
CTGCAGCACG TGCCCGTCAC ACGCAAGCCC TATGACGCCA ATGCCATTCT GGCCAGCTTG
AAACGGTTGC TCGATCTGGG CTGA
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| Protein sequence | MTFNPQVNLT NCDREPIQTP GSIQPHGCLL ACDASATVVL RHSVNAPDVL GITGDINGQK
LQAVLGDEVA HTLRNALART REASRPALSF SVRLPNGQAF DVAAHLFKGT AILEFEPAGA
SIAEPIELAR TLIAQLREIE QTSKLFRDAA RFVRAVLGYD RVMIYQLGTD GAGKVVAEAR
RSDLESFMGQ YFPASDIPQQ ARALYLRNPI RVISDAQFKT VAIEPVLDPS GEPLDLSYAH
LRSVSPIHCE YLCNMGVGAS MSISVIVNGE LWGMIACHHY APRTLAMGQR VAAEMFGEFF
SLHIETLRSR QKLEAAVQVH KALDSMLRDA NQTADIDSFF HARLPRLMSL IPCDGIGMSL
QGRWSTVGLA PPKTAVPDLL RLADMVSEGR TWASNRLSMV LPSAQAYFTE VSGVLIIPMS
QQPRDYLIFF RKEVVETLDW AGDPNKTYDS GLLGDRLTPR KSFAIWKETV HQQSLPWTEQ
DRQFGDSIRT AIVEVVLYNS ELLASERTKA EVRQRILNEE LNHRVKNILS LIGALVAHPT
SESQTLQDYV ATLKGRIQAL SLAHDQVVRG DGGGRLAKLL EAELSPYRTA AGVIELQGPN
VTLDARAYSV MALVLHELAT NAAKYGALSR AGGKLAVSWA IDATNACAIS WRESGGPTVR
PPTRNGFGSV LIDRSIPFDL GGTSAVEYHA EGLQGLFKIP AMHLSVAEAA EPASLAAPIA
RAKDIFAAQT GLSVLILEDQ LVIAIGLEQI LNDAQIKDVI TASSEDEALR LIASRTPDAA
ILDVNLGTGT SISVADELVR RQIPFLFATG YGDSISIPEH LQHVPVTRKP YDANAILASL
KRLLDLG
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