| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_2584 |
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| Symbol | |
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| ID | 5870373 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 2901422 |
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| End bp | 2902303 |
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| Gene Length | 882 bp |
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| Protein Length | 293 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641547707 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001668819 |
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| Protein GI | 167033588 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.156706 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.234942 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCTCA AGGCATTGCG TTGCTGTGTC GAAATCGTCC GGCAAGGCAG CTTCACCAAG
GCCGCGCAGC ACCTGCACAT CGCCCAGCCA GCGCTGAGCA TGGCCGTTAC CCGGCTGGAA
GAAGAACTGG GCGTCACCCT GTTCAACCGC ACCACGCGCA AAGTGATCCT CACGGCAGAA
GGCGAGCAAT TTCTGCCACG CATTGCCTCG GCCCTGCGCG AGATGGATGT TGCCCGACAA
GAACTGCGCG ACATGGCCGA CCTGAAGCGC GGCGAAGTGC GCCTGGGTAT TCCGCCGATG
TTCGGCCTGC ACTACGTGCC CGGTTTGATG AACGCCTTCC GCCAGTTGTA CCCAGGCATT
GCCATGACCG TGTTCGAAGG CAGTGCCGAA GACATTGGCC ATCGGCTGGA GCAGCGGGAA
ATCGACCTCG CACTGCTGGA GTCCCGGCGT GTGCCGCCGG ACAAGGAATC GATCCTGCTG
GGCAGCGACG AGATGCTGGC GTGCATGCAC CCCGATCACC CCTATGCCGG CAAGGCTTTC
CTCACCGCCG AAGACCTGCG TAATACCGAC ATGGTGGTGT TCGACCGCAC CTTCGTGCAA
CGCCATCTGC TGGACGCGTT CTTTGCCGAG CATGGCATCA CTTACCAAGT GGCGCTGCAG
AGCAACTTCG TCTCGCTTGT GGTGCAGGCC GCATTGGACA ACATGGGGGT GGCCACCCTG
CTGCGCTCGG TGCAACAGCG CACGCCAGGC ATCGTCGGTG TGCCCTTCCG GCCGGCACAG
CAGATGAGTT TCCGCTTGTG CTGGCGCTCG GGGGAATACC TTTCGCTCGC CAGCAAACGG
TTCATCGACT TTGCCGCGCA AACCCACTAC CTGGAGCGAT AA
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| Protein sequence | MNLKALRCCV EIVRQGSFTK AAQHLHIAQP ALSMAVTRLE EELGVTLFNR TTRKVILTAE
GEQFLPRIAS ALREMDVARQ ELRDMADLKR GEVRLGIPPM FGLHYVPGLM NAFRQLYPGI
AMTVFEGSAE DIGHRLEQRE IDLALLESRR VPPDKESILL GSDEMLACMH PDHPYAGKAF
LTAEDLRNTD MVVFDRTFVQ RHLLDAFFAE HGITYQVALQ SNFVSLVVQA ALDNMGVATL
LRSVQQRTPG IVGVPFRPAQ QMSFRLCWRS GEYLSLASKR FIDFAAQTHY LER
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