Gene PputGB1_2573 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_2573 
Symbol 
ID5870362 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp2890231 
End bp2891496 
Gene Length1266 bp 
Protein Length421 aa 
Translation table11 
GC content65% 
IMG OID641547696 
Productintegral membrane sensor signal transduction histidine kinase 
Protein accessionYP_001668808 
Protein GI167033577 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.236887 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGCGCC GGCGCCTGTT CTGGAAGCTG TTTCTGGCGT TCTGGCTGGC CAACTGCCTG 
ACCTTCCTGG TGGGGGCGGG CGCTTTCATG CTCAATGACT GGCGTGGCGA TACGCCGGCG
CTGCGCTCGC TGCTGGCCAC CGAACTGCAG CTGTTGCAGG GTTACGGCGA GCAGGCAGGC
CGACAGCTGC TTGAGGTATC ACCGCAACCG CCCGATGTAC AGGTGGGCCT TTACGACAGC
CAAGGCCAGT TGCTGGCCGG CAGAGCGGTG CCGGTGGCGC GTTTCGAGCA GGCGTTGAGC
GACCGTGAAG GTCGCCCGCT GGTGCTACGT GCTTCGGTGG CCACGGTGCT TGGCGAGCCA
CCGCGCCCGC GTGGTATGGG CCCGTTGTTT ACCGGCACGC TGATGAGTGC ACTGTTCGCC
TTCCTGTGCA GCTTGTACCT GACTCGCCCG CTGGCCTGGT TACGTGAGGC GATGGGCCAG
GTAGCCCAGG GCCGCTTCGA AGTGCGGGTA AAGCCCAGGC TGGGCAAGCG CCGCGACGAG
ATCGTCGAGC TGGCGGAGGA CTGCGACCGC ATGGCCGGTC AGCTGAAGGC ACTGGTGCAG
GCGCAGCAGA ACCTGCTGCA CGATATTTCC CACGAACTGC GTTCACCGCT GACGCGCATG
CATGCTGCCA TTGGCCTGAT GCGCCAGCAG CCCGACCGGC ACGACATGCT GGAGCGGGTG
GAGCGCGAAT CGCGGCGCAT GGATGACCTG ATCGAGCAGT TGTTGACCTT GGCCCGCGCC
CAGGCTCGCC AGGGCGATAG CGACTTTGCC AGCGTGGATG TGGTGGAGCT GCTGGCGCAG
ATCGTCGAAG ACGCCCGCTT CGAGGCCGGC ATGAAGCAAT GCCAGGTGTC TTTGCAAGCC
CAGGGTGCGT TTCTCATCCA CGGTCATGAA GAACTGCTGT ACCGGGGGTT CGAGAACATC
ATCCGCAACG CGGTGCGCTA CACCGCAGTT GGTACGGAGG TGTTGGTGGA GGCCGCTATG
GCGCCGGGTG GGCAATGGTT TCAGGTCTGT GTCAGCGACC ATGGGCCGGG CGTAGATCCG
GCGCGCCTGC CGCGGATCTT CGAGCCGTTC GACCGGGGTG CCGACAGCGA TGGTGATGGT
TTCGGCCTGG GCTTGGCTAT CGCCCAGCGG GCCATTGCCC TGCACGGCGG TAGTATCACT
GCGCAGGCCG CCGCCACTGG TGGTCTGCGG GTGCGCATCG AACTGCCACA GGCAAGCCCG
GCTTGA
 
Protein sequence
MMRRRLFWKL FLAFWLANCL TFLVGAGAFM LNDWRGDTPA LRSLLATELQ LLQGYGEQAG 
RQLLEVSPQP PDVQVGLYDS QGQLLAGRAV PVARFEQALS DREGRPLVLR ASVATVLGEP
PRPRGMGPLF TGTLMSALFA FLCSLYLTRP LAWLREAMGQ VAQGRFEVRV KPRLGKRRDE
IVELAEDCDR MAGQLKALVQ AQQNLLHDIS HELRSPLTRM HAAIGLMRQQ PDRHDMLERV
ERESRRMDDL IEQLLTLARA QARQGDSDFA SVDVVELLAQ IVEDARFEAG MKQCQVSLQA
QGAFLIHGHE ELLYRGFENI IRNAVRYTAV GTEVLVEAAM APGGQWFQVC VSDHGPGVDP
ARLPRIFEPF DRGADSDGDG FGLGLAIAQR AIALHGGSIT AQAAATGGLR VRIELPQASP
A