Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_2571 |
Symbol | |
ID | 5870360 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | - |
Start bp | 2886981 |
End bp | 2889380 |
Gene Length | 2400 bp |
Protein Length | 799 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 641547694 |
Product | outer membrane protein assembly complex, YaeT protein |
Protein accession | YP_001668806 |
Protein GI | 167033575 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG4775] Outer membrane protein/protective antigen OMA87 |
TIGRFAM ID | [TIGR03303] outer membrane protein assembly complex, YaeT protein |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 0.227309 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCTGCACT CCGAATCCGC TTGTCTGGAA CCCCCGATGA ACTACCCGCG CCTGTTGCTC TCCATCCTGT TGCTGAAAGC CACGCTGGCC CAGGCCTCCC CCTTCAGGAT CGCCGACATC CGCGTCAACG GCCTGCAGCG GGTTTCCGCC GGCAGTGTGT TCGGTGCCCT GCCGCTGAAC GTCGGCGACC AGGCCGATGA CCGCCGCCTG GTGGACTCGA CCCGTTCCCT GTTCAAGACC GGGTTCTTCC AGGACATCCA GTTGAACCGC GATGGCAATG TGCTGATCAT CAACGTGGTC GAGCGCCCGT CGGTGTCGAG CATCGAGATC GAAGGCAACA AGGCGATCAG CACCGAAGAC CTGATGAAGG GCCTGAAGCA ATCGGGCCTG GCCGAGGGCG AAATCTTCCA GCGTGCCACC CTCGAAGGTG TGCGTAACGA GCTGCAGCGC CAGTACGTGG CCCAGGGCCG CTACTCGGCC GAGGTCGACG CCGAAGTGGT GCCGCAGCCG CGCAACCGTG TGGCGCTGAA GATCAAGATC AACGAAGGCA CCGTCGCCGC CATCCAGCAC ATCAACATCG TTGGCAACAA CGTGTTCGAT GATGAAACCC TGGGGCAGCT GTTCGAGCTG AAGACCACCA ACTGGCTGTC GTTCTTCAAG AACGATGACA AGTACGCCCG TGAAAAACTC TCCGGTGACC TGGAGCGCCT GCGTTCCTAC TACCTGGACC GCGGCTACAT CAACATGGAC ATCGCCTCCA CCCAGGTGTC CATCACGCCG GACAAGAAGC ACGTCTACAT CACCGTCAAC ATCAACGAAG GCGAGAAGTA CACCGTTCGC GACGTGAAGC TGTCCGGTGA CCTCAAGGTG CCGGAAGACC AGGTCAAGTC GCTGCTGCTG GTGCAGCCAG GCCAGGTGTT CTCGCGCAAG GTGATGACCA CCACCTCCGA GCTGATCACC CGCCGCCTGG GTAACGAAGG CTACACCTTC GCCAACGTCA ACGGCGTGCC ACAGCCGAAC GACCAGGACC ACACGGTCGA CATCATGTTC GTGGTCGACC CGGGCAAGCG TGCCTACGTC AACCGCATCA ACTACCGCGG CAACACCAAG ACCGAAGACG AAGTGCTGCG CCGCGAAATG CGCCAGATGG AAGGCGGGTG GGCTTCGACC TACCTGATCG ACCAGTCCAA GACCCGTCTG GAGCGCCTGG GCTTCTTCAA GGAAGTCAAC GTCGAGACCC CACCGGTGCC GGGCACCGAC GACCAGGTCG ACGTCAACTA CAGCGTCGAA GAGCAGGCCT CCGGCTCGAT CACCGCCAGC GTCGGTTTCG CCCAGAGCGC CGGCCTGATC CTCGGTGGTT CGATCAGCCA GAGCAACTTC CTCGGTACCG GTAACAAGGT GGCCATCGGC CTGACGCGCA GCGAATACCA GACCAAGTAC AACTTCGGTT TCACCGACCC CTACTTCACC GCCGACGGGG TCAGCCTGGG CTACAACCTG TTCTACAACA GCACCGACTA CAGCGATTAC TACGACGATG GCGTTTCGTA TTATGCGATC AACAGCTACG GCGCCGGGGT CAGCTTTGGC TACCCGATCA GCGAAACCTC GCGCCTGAGC TACGGCCTCA CCCTGCAGCA CGACGACCTT TCGCCGGGCA CCTACAGCGC CGACGAGATC TACGACTTCA TTTCCCGCGA GGGCAAGAGT TTCAACAACC TCAAGGCCTC GATCGGCTGG TCGGAATCCA CCCTCAATAA AGGCGTACTG GCCACCCGTG GCCACTCGCA GAGCCTGACG CTGATGGCCA CCACCCCAGG CAGCGACCTG TCATTCTACA AGCTGGACTA CAACGGCCAG GCCTACTTGC CGGTGACCAA CAACACCGCA CTGCGCCTGC ACACCAGCCT GGGCTATGGC AATGGCTACG GCTCCACCGA CGGCTTGCCG TTCTATGAAA GCTACACCGC AGGTGGCCAG GGTTCGGTGC GTGGGTTCAA GGACGGCACC CTCGGCCCAC GCAACACCCC GGCCACCGGT GCTTATGCAA GGTCAGGCCA GGCTTACTAC TCCGACCGAG ACACCGATGT GCTGGGGGGC AATATCCTGA TCACCGGCGG TGCCGAGTAC ATTTTCCCGT TGCCGTTCGT GAAGGACCAG AGCCAGCTGC GCAGCTCATT GTTCGTCGAT GCGGGCAATG TGTATGCCGA CACCTGCTAC CTGTCCACCA CCCAAGGCTG TGGCAGCGTC GACCTGGCGC AGATGGCCGT GTCGCTGGGG GTTGGCGTGA CCTGGTACAG CCCGATGGGG CCGCTGAGCT TCAGCCTGGC GGCGCCGTTG AAAAAGCCGG ATAACGCCGA GACCCAGATT TTCCAGTTCT CCCTGGGGCA GACATTCTGA
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Protein sequence | MLHSESACLE PPMNYPRLLL SILLLKATLA QASPFRIADI RVNGLQRVSA GSVFGALPLN VGDQADDRRL VDSTRSLFKT GFFQDIQLNR DGNVLIINVV ERPSVSSIEI EGNKAISTED LMKGLKQSGL AEGEIFQRAT LEGVRNELQR QYVAQGRYSA EVDAEVVPQP RNRVALKIKI NEGTVAAIQH INIVGNNVFD DETLGQLFEL KTTNWLSFFK NDDKYAREKL SGDLERLRSY YLDRGYINMD IASTQVSITP DKKHVYITVN INEGEKYTVR DVKLSGDLKV PEDQVKSLLL VQPGQVFSRK VMTTTSELIT RRLGNEGYTF ANVNGVPQPN DQDHTVDIMF VVDPGKRAYV NRINYRGNTK TEDEVLRREM RQMEGGWAST YLIDQSKTRL ERLGFFKEVN VETPPVPGTD DQVDVNYSVE EQASGSITAS VGFAQSAGLI LGGSISQSNF LGTGNKVAIG LTRSEYQTKY NFGFTDPYFT ADGVSLGYNL FYNSTDYSDY YDDGVSYYAI NSYGAGVSFG YPISETSRLS YGLTLQHDDL SPGTYSADEI YDFISREGKS FNNLKASIGW SESTLNKGVL ATRGHSQSLT LMATTPGSDL SFYKLDYNGQ AYLPVTNNTA LRLHTSLGYG NGYGSTDGLP FYESYTAGGQ GSVRGFKDGT LGPRNTPATG AYARSGQAYY SDRDTDVLGG NILITGGAEY IFPLPFVKDQ SQLRSSLFVD AGNVYADTCY LSTTQGCGSV DLAQMAVSLG VGVTWYSPMG PLSFSLAAPL KKPDNAETQI FQFSLGQTF
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