Gene PputGB1_2543 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_2543 
Symbol 
ID5870332 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp2855207 
End bp2856181 
Gene Length975 bp 
Protein Length324 aa 
Translation table11 
GC content55% 
IMG OID641547666 
Producthypothetical protein 
Protein accessionYP_001668778 
Protein GI167033547 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.393427 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.00552754 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGATTACCA CGACCTTTTC ACAACACCCT TGTTTGCAAA AGCACTTCGA TCATTCTTGG 
CAGGCAAACA ATTCGCTGCG CCAGGCCATG CAGTACGCCC TCGCTCCGCT GGTCAGGCAA
GCCCCCGTTT CTGTTGTTGT CGTGGGGTCT TACGGGCGGT GCGAGGTCTC GCGTATTTCG
GACATCGATT TTTTCATCGT GCATGACGGC AGCATGTCTG AGGCCCGGCT GCTCGACGTA
CTGCATCAAG TCAAAAACCT GGTTCGACCG CTCAGCTGGC CGGGTGAGAG CGATGAGTCC
AAGTTTGGTC AGGGCGCGCT TTCACTCTAT TCGGAGTTGA GCAACCACAT TGGATGGAAG
CAGGAAAGCA ATACGGCGCT CACCCGACGA ATGCTGCTCC TGCTGGAAGG CCGCCCACTG
TTTGGCGATG AGAGTTTCAC TCGGTGGCGA ACTGAGTTGC TGTGCCGGTA TGTGGCAAGC
GACCAAGGAA CAGGGTTGCC CAGGTTCATG CTTAATGATG TGGTTCGGTA TTACCGCAGC
ATGATGGCGA ACTTCGAGGA AAAGCGGGCT GAAGGCAAGG CTTGGGGCGT GCGTAACATC
AAGCTGAAGT TCTCTCGCAA GCTGCTTTAC CTGGGAGGGA TCGTGGTGAT TGCCGAGGCC
CATGGTCTAC CGGCCAGTGA AAAGATTAAA CGCCTCGACC ATTGGCTTTC ATTCACACCG
CTACAACGCG TTGCGATGCT GGGACAGTCA AACCCCCATA CTGGGCAGTT GCTAGAGCAG
TATGCCTTGT TCCTGGACTT GATATCTTCA CTGGAAAATC GTCGTCGCTT GGACTCACTG
AGCCCAGAAT ACGCACGGAC AGATCCTCTC TATCGAGAAA TTTCCATCGT AGGCAAGGCA
TTTTCCGAGG GGCTTGAGCA ATGGCTCGCA GCCCAGTATC CAGGCCACCC AATCCTGCAC
GCAATGCTTT TCTGA
 
Protein sequence
MITTTFSQHP CLQKHFDHSW QANNSLRQAM QYALAPLVRQ APVSVVVVGS YGRCEVSRIS 
DIDFFIVHDG SMSEARLLDV LHQVKNLVRP LSWPGESDES KFGQGALSLY SELSNHIGWK
QESNTALTRR MLLLLEGRPL FGDESFTRWR TELLCRYVAS DQGTGLPRFM LNDVVRYYRS
MMANFEEKRA EGKAWGVRNI KLKFSRKLLY LGGIVVIAEA HGLPASEKIK RLDHWLSFTP
LQRVAMLGQS NPHTGQLLEQ YALFLDLISS LENRRRLDSL SPEYARTDPL YREISIVGKA
FSEGLEQWLA AQYPGHPILH AMLF