Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_2536 |
Symbol | |
ID | 5870325 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | - |
Start bp | 2848912 |
End bp | 2849706 |
Gene Length | 795 bp |
Protein Length | 264 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 641547659 |
Product | aldolase II superfamily protein |
Protein accession | YP_001668771 |
Protein GI | 167033540 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0235] Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.0456669 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.00862817 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGACTGCAT TGTCTGTCAT CGCCCCCCAG GAAAACACCG TGCGCCAACG GGTCAGCGCC GAAGAATGGG AGGTGCGAGT AAAGCTGGCT GCGGCCTATC GCCTGGCTGC CCTGTTCCGC TGGACCGACC ATATCTACAC ACACTTCTCG GCACGCGTGC CTGGGCCCGA CGAACACTTT CTGATCAACG CCTTCGGCCT GCTGTTCGAC GAGATCACCG CCTCCAACCT GGTGAAGGTC GATGTAGATG GCACGATCAT CGATGATCCC CTGGGCCTGG GCATCAACCA GGCCGGCTAT GTGATTCACA GCGCCATTCA CCGTGCGCGG CCCGACCTCA AGGCCGTGCT GCACACCCAC ACGCGCGATG GCGCAGCAGT GTCGGCACAA CGCGATGGCC TGCTGCCAAT CTCGCAGCAT GCCCTGGCCT ACTACAGCCG CGTGGTGTAC CACGACTACG AAGGCGTCGC CCTGGACCTG GACGAGCAGC AGCGGCTGGT GGCCAACCTG GGCGACAGCA ATATCCTGAT CCTACGCAAC CATGGCCTGC TGACCGGGGG AATCAGCGTC GAGCATGCCT TCCGCGAGCT GCACGGGCTG GAGCGGGCCT GCAACATCCA GGTGGCGGCG CAGGCAGGGG GCAACGACCA ACTGCTGTAC GCGGCGCCGG CAGCAATTGC CAAGGTGCAT GAGCAGTCGA AGCGGTTTTC CGATGGGCTG GGGGAAGGGA TCCAGCGGCA TTGGGATGCG CTGATACGCC AGCTGGATCG GGAGGGACTG GATTACCAGA ACTGA
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Protein sequence | MTALSVIAPQ ENTVRQRVSA EEWEVRVKLA AAYRLAALFR WTDHIYTHFS ARVPGPDEHF LINAFGLLFD EITASNLVKV DVDGTIIDDP LGLGINQAGY VIHSAIHRAR PDLKAVLHTH TRDGAAVSAQ RDGLLPISQH ALAYYSRVVY HDYEGVALDL DEQQRLVANL GDSNILILRN HGLLTGGISV EHAFRELHGL ERACNIQVAA QAGGNDQLLY AAPAAIAKVH EQSKRFSDGL GEGIQRHWDA LIRQLDREGL DYQN
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