| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_2528 |
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| Symbol | |
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| ID | 5870317 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 2842725 |
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| End bp | 2843339 |
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| Gene Length | 615 bp |
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| Protein Length | 204 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 641547651 |
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| Product | two component LuxR family transcriptional regulator |
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| Protein accession | YP_001668763 |
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| Protein GI | 167033532 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.0522002 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAACCG TGCTGATCGT CGACGACCAC CCCATCGTCC GGCTGTCGCT GCGCCTACTG
CTCGAACGCG AGCGCTTCCA TGTAGTCGGC GAAGTTGGCG ATGGCAGTGA AGTGGCTCAG
GAGGCTCGCA GGCTGCGCCC GGACGTGGTC ATTCTTGATA TCGGCCTGCC TGGCCTGGAC
GGCATGGAAG TCATCAAGCG CCTGCAGTGT CTGGAGCCGG CGCCGAAGAT CATGGTGCTG
ACTGGCCAGG CCACCGACCT GTATGTGCGC CGCTGCCTGG ATGCCGGGAT CGGCGCCTTC
GTCACCAAGG AAGAGGACCA CGAAGCGCTG CTGTTTGCCC TCAAGGCCCT GGTCAAGGGC
TATTCAACCT TCCCGCAGAT GTCGGTCAAC AGCAATTCGC TGGAAAGCGA GCCAGTACGC
CTGGCCAGCC TCTCCAACCG CGAAATGGAA GTATTGCGGC GCCTGGCGCG CGGTGAAAAC
AACAAGAATA TCGGCACCTG CATGAACCTC AGCGCCAAGA CCATCAGCAC CTACCGGGGC
CGAATCATGG AAAAGCTCAA GACTGAATCA CTGGTTGAAA TGGTCGACCT GGCCAAGCGT
AACAGCGTCC TTTGA
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| Protein sequence | MTTVLIVDDH PIVRLSLRLL LERERFHVVG EVGDGSEVAQ EARRLRPDVV ILDIGLPGLD
GMEVIKRLQC LEPAPKIMVL TGQATDLYVR RCLDAGIGAF VTKEEDHEAL LFALKALVKG
YSTFPQMSVN SNSLESEPVR LASLSNREME VLRRLARGEN NKNIGTCMNL SAKTISTYRG
RIMEKLKTES LVEMVDLAKR NSVL
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