| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_2518 |
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| Symbol | |
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| ID | 5870307 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 2828844 |
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| End bp | 2829518 |
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| Gene Length | 675 bp |
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| Protein Length | 224 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641547641 |
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| Product | lytic transglycosylase catalytic |
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| Protein accession | YP_001668753 |
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| Protein GI | 167033522 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.116955 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCTTGCGT CGTGGTCATC GTCCACGGGT TTTCCGGGGC ATTTTCCCCA CATTGGGGGC
CACGACGAAG AGGCGACCGA CATGCGTGGA CTCATCCTCG GTTTGATCTG GCTGGCGGCA
GGTGCTGCCC AGGCCGATAT GTACATCTCA ATCGATGCCA AGGGTGGCTA TGTACTGACC
AACGTCCATC GACCAGGGCG CCACTATGAG AAGGTAATCG CCGAGCCGTT GGCCCAGGGC
GGGCCGGCCA ATGCGCAGAT GATCACGGGT CGCCCTTACG CCGAGGTGGT GGCGACGGCG
GCGCGCATTC ACAATGTGCC GCCGGCGCTG CTGCATGCAC TGATCAAGGC CGAGTCCGGG
TACAACCCCA AGGCCCGATC GCGGGCGGGG GCGGTGGGGT TGATGCAATT GATGCCGGAT
ACCGCCCGAG AAATGGGTGT GGAAGACCGC CTGGACCCGG AAGACAACGT GCAGGGCGGG
GCACGCTACA TCAAGCAGAT GCTCACGCTG TTCGACAACG ACATCACTTT GGCCGTGGCG
GCCTACAACG CCGGACCGGA TGCCGTATTG CGAAGGGGGG CCGTGCCGCC GTTCGCCGAG
ACACGGCGTT ATGTGCCCAC AGTACTGCGG GAATATCGCA AGTTGCAGGG GTTGGCAGCT
GATTCGCCTT TGTAG
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| Protein sequence | MLASWSSSTG FPGHFPHIGG HDEEATDMRG LILGLIWLAA GAAQADMYIS IDAKGGYVLT
NVHRPGRHYE KVIAEPLAQG GPANAQMITG RPYAEVVATA ARIHNVPPAL LHALIKAESG
YNPKARSRAG AVGLMQLMPD TAREMGVEDR LDPEDNVQGG ARYIKQMLTL FDNDITLAVA
AYNAGPDAVL RRGAVPPFAE TRRYVPTVLR EYRKLQGLAA DSPL
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