| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_2509 |
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| Symbol | |
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| ID | 5870298 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 2816459 |
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| End bp | 2817874 |
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| Gene Length | 1416 bp |
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| Protein Length | 471 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641547632 |
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| Product | RND efflux system outer membrane lipoprotein |
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| Protein accession | YP_001668744 |
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| Protein GI | 167033513 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.293505 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCTGC TCAAACCCCT GACCCCAAGC CTGCTGGCAC TGGCCCTGGC GGCCTGTGCG
GTAGGCCCGG ACTACCAGGC CCCCGCTACC GAGCCTGCGC AGCTGGCCAG CGATGTGCAG
GCCAAGGCCT ACGACCGAAG CCGCTTCGAG AGCCTGTGGT GGAAGCAGTT CGACGACCCG
GTGCTGAACC AGCTGGTGCA GGCTTCGCTG GACGGCAACC GTGATTTGCG CGTGGCCTTC
GCCCGCCTGA AGTCGGCCCG CTCGATCCGT GAAGACGCTG AGAACGATCA GTTCCCGGTG
GTCACCAGCC GCGCCAGCAG CGACATCGGC AAGGGCCAGA TCCCAGGCCA GACCACCCAG
CGGGTGAACA GCGAGCGCTA CGACCTGGGC CTGGACATGG CCTGGGAGCT TGACCTGTTC
GGCCGCATCC AGCGCCAGAT CGAAGCCAGC GAAGCCCAGG AAGCGGTAGC CGCCGCCGAC
CTGCAGCAGT TGCAAGTCAG CCTGATCGCC GAACTGGTCG ATGCCTACGG GCAATTGCGC
GGTGCCCAGT TACGCGAAAA AATCGCCCTG GCCAACCTCA AGACCCAGCA GGAATCGCGC
ACTATCACCG AAACCCTGCG CGATGCCGGC GTGGGCAACG ACCTTGACGT GGTGCGTGCC
GATGCGCGCC TGGCCGGGGT CGAAGCCACC GTGCCGCAAC TGCAGGCCGA ACAGGCACGG
GCGCGGCACC GCATCGCCAC CCTGCTCGGC CAACGCCCTG ACGCGCTCAG CGTAGACCTG
TCGCCCAAAG CCCTGCCGGC CATCGCCAAG GCGCTGCCGG TGGGTGACCC GGGTGAGTTG
CTGCGCCGCC GCCCGGACAT CCGCAGCGCC GAACGCCAGC TGGCGGCCGC CACCGCCAAC
GTGGGCGTGG CCACCGCCGA CCTGTTCCCG CGGGTCAGCC TCAGCGGCTT CCTCGGCTTT
ACCGCCGCGC GCGGCTCGCA GATCGGCTCC TCGGCGGCCA ACGCCTGGGC GCTGGGCCCG
AGCATTACCT GGGCGGCCTT CGACCTGGGC AGCGTGCGGG CCCGCCTGCG CGGCGCCAAG
GCCGATGCCG AAGGGGCATT GGCCAACTAC GAGCAGCAAG TACTGCTGGC CCTGGAAGAG
TCGGCCAACG CCTTCAGCGA TTACGACAAA ACCCAGCAAC GGCTGTTGTC GCTGATGCGT
CAGAGCGACG CCAGCCGCAA GGCGGCGGAG CTGGCCTCGA TTCGCTATCG CGAGGGTACG
GTGGATTACC TGGTACTGCT CGATGCCGAG CGCGAACGGC TGAGCGCTGA AGATGCACAG
GCCCAGGGTG AGGTTGAGCT CTACCGCGGC ATCGTCTCGA TCTACAAGGC CCTGGGCGGT
GGCTGGCAAC CGGAGACCGT TGCCAGCGCC CGCTGA
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| Protein sequence | MNLLKPLTPS LLALALAACA VGPDYQAPAT EPAQLASDVQ AKAYDRSRFE SLWWKQFDDP
VLNQLVQASL DGNRDLRVAF ARLKSARSIR EDAENDQFPV VTSRASSDIG KGQIPGQTTQ
RVNSERYDLG LDMAWELDLF GRIQRQIEAS EAQEAVAAAD LQQLQVSLIA ELVDAYGQLR
GAQLREKIAL ANLKTQQESR TITETLRDAG VGNDLDVVRA DARLAGVEAT VPQLQAEQAR
ARHRIATLLG QRPDALSVDL SPKALPAIAK ALPVGDPGEL LRRRPDIRSA ERQLAAATAN
VGVATADLFP RVSLSGFLGF TAARGSQIGS SAANAWALGP SITWAAFDLG SVRARLRGAK
ADAEGALANY EQQVLLALEE SANAFSDYDK TQQRLLSLMR QSDASRKAAE LASIRYREGT
VDYLVLLDAE RERLSAEDAQ AQGEVELYRG IVSIYKALGG GWQPETVASA R
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