| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_2379 |
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| Symbol | |
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| ID | 5870168 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 2664377 |
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| End bp | 2665786 |
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| Gene Length | 1410 bp |
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| Protein Length | 469 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641547503 |
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| Product | transcriptional regulator |
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| Protein accession | YP_001668615 |
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| Protein GI | 167033384 |
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| COG category | [E] Amino acid transport and metabolism
[K] Transcription |
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| COG ID | [COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.228366 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 0.534962 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACGCT ACGAACGCTT CGCCGACGAC ATTGCCGAAC TGATTCGCTC CGGGGTGCTG
GGCCCCGGCC AGCGCGTGCC TTCGGTGCGC TACGCCAGCC AGACCCACGG GGTCAGCCCG
TCTACTGTGT TCCAGGCCTA TTACCTGCTG GAGCGGCGCG GGTTGATTCG CGCCCGGCCG
CGCTCCGGGT ATTTCGTCAA CGCCCACGCT CCGCGCCAGT TCAGCGAGCC GCAGGCGCTG
CAGCCGGTCA GCGAGTCTAC CGACGTGGAC GTCAGCGCGT TGGTGTTCTC CATCCTCGAC
TCGATCAAAG ACCCCAACAC CATACCGTTC GGCTCGGCCT TCCCCAGCCC CGAGCTGTTC
CCCCTGCAAC GCTTGTCGCG CTCGCTGGCC AGCGCCAGCC GCAGCATGGA CCCGCGCATG
GTGGTGACTG ACCTGTCGCC GGGCAACCCG CAGCTGCGCC GGCAAATCGC GCTGCGTTAC
ATGGTCGGCG GGCTGATGTT GCCCATGGAA GAGCTGCTGA TCACCAACGG TGCGCTGGAA
GCCTTGAACC TGTGCCTGCA GGCAGTGACC CAGCCGGGTG ACCTGGTCGC GATCGAAGCC
CCCGCCTTCT ATGCCTGCCT GCAGGTGCTG GAGCGGCTCA AGCTCAAGGC CGTGGAGATT
CCGGTCCACC CGCGCGAGGG CATGGACCTG GGGGTACTTG CGCAAACCCT GGAGAAGCAC
CCGGTTAAAG CCGTGTGGTG CATGACCAAC TTCCAGAACC CGGTGGGTGC GAGCATGCCA
GAAGCCAAGA AGCAGGCTTT GGTTGAGTTG CTGACACGCC ATCAGGTGCC GTTGATCGAA
GACGACGTCT ATGCCGAGCT GTACTACTCG CAACAGGCGC CCAAGCCAGC CAAGGCTTTC
GACACCCAAG GCCTGGTCAT GCACTGCGGT TCGTTCGCCA AAAGCCTGGC ACCGGGCTAT
CGCATTGGCT GGGTGGCCGC CGGGCGCTTT GCGCAGAAGA TCGAACGGCT GAAACTGATG
ACTTCGTTGT GTGCCTCGAT GCCGGCCCAG GCGGCCATCG CCGACTACCT GCAACACGGC
GGCTACGACC GCCACCTGCG CAAACTGCGC TACGCCCTGG AAGGCCAGCA GGCCAACATG
CTGGCGGCCA TCGCGCGCCA CTTCCCGGCG CAGACGCGGG TCAGCCAGCC CTCTGGCGGC
TACTTCCTAT GGCTGGAACT GCCCGAGCAA ATGGACGCCC TCAAGCTGTT CCACATGGCC
CTGGCGCAAG GGATCAGTAT CGCTCCCGGG CCAATCTTTT CACCCACCCG GCGCTTCGGC
AACTGCATCC GCCTGAACTA CGGCAGCCCC TGGCACGACG GTGCCGAGCG GGCCATGGAA
ACCCTTGGGC GGATCATTCG CTCGTTTTGA
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| Protein sequence | MKRYERFADD IAELIRSGVL GPGQRVPSVR YASQTHGVSP STVFQAYYLL ERRGLIRARP
RSGYFVNAHA PRQFSEPQAL QPVSESTDVD VSALVFSILD SIKDPNTIPF GSAFPSPELF
PLQRLSRSLA SASRSMDPRM VVTDLSPGNP QLRRQIALRY MVGGLMLPME ELLITNGALE
ALNLCLQAVT QPGDLVAIEA PAFYACLQVL ERLKLKAVEI PVHPREGMDL GVLAQTLEKH
PVKAVWCMTN FQNPVGASMP EAKKQALVEL LTRHQVPLIE DDVYAELYYS QQAPKPAKAF
DTQGLVMHCG SFAKSLAPGY RIGWVAAGRF AQKIERLKLM TSLCASMPAQ AAIADYLQHG
GYDRHLRKLR YALEGQQANM LAAIARHFPA QTRVSQPSGG YFLWLELPEQ MDALKLFHMA
LAQGISIAPG PIFSPTRRFG NCIRLNYGSP WHDGAERAME TLGRIIRSF
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