Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_2369 |
Symbol | |
ID | 5870158 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | - |
Start bp | 2651662 |
End bp | 2653284 |
Gene Length | 1623 bp |
Protein Length | 540 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641547493 |
Product | acyl-CoA synthetase |
Protein accession | YP_001668605 |
Protein GI | 167033374 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 43 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGATCT ATGCCCAGGG CCTGATGCCC GCTGCCGTCA ACCATGTCGC CCTCACCCCG CTGAGCTTCA TCGAACGCAC CGCCGCCGTA TACGGCAATT ACCCGGCCGT CATCCACGGC GCTATCCGCC GCAACTGGCA GGAAACCTAC CAACGCTGCC TGCGCCTGGC CAGTGCCCTG GCTGGCCGTG GCATCGGCCG TGGCGACACC GTGGCAGTGA TGCTACCCAA CACCCCGGCC ATGCTTGAGG CGCACTTCGG CGTACCCATG ATCGGTGCCG TGCTCAATAC CTTGAACGTG CGCCTGGATG CCGAGGCCAT CGCCTTCATG CTGCAGCACG GCGAGGCCAA GGTGCTGATC ACCGACCGCG AGTTCCATGC CGTCATCGAA GCCGCCCTGG CGCTGCTCGA ACACCCGCCG CTGGTGATTG ATGTGGATGA CCCGGAGTAT GGCGAGGGCC GCGCTGTCAG CGAACTGGAC TATGAAGCCC TGCTTGCCGA AGGGGACCCG GACTTTGCCT GGGAATGGCC CGATGACGAG TGGCAGGCCA TTTCGCTGAA CTACACCTCC GGTACCACCG GCAACCCCAA GGGCGTGGTC TACCACCACC GCGGCGCTTA CCTGAACGCA CTGGGCAACC AGATGACCTG GGCCATGGGG CACCGCCCGG TTTACCTGTG GACCCTGCCA ATGTTCCACT GCAACGGCTG GTGCTACCCC TGGACCATCA CCGCGCTGGC CGGCACCCAT GTGTTCCTGC GTCGGGTCGA CCCGCAGAAA ATCCTCACCC TGATCCGCGA GCACCGGGTC AGCCACCTGT GCGGGGCGCC AATCGTGCTC AACGCCCTGG TCAACATGCC CGAAGCCGCC AAGGCAGCCA TCGAGCACCC GGTGCAGGCC ATGGTCGCCG GTGCCGCGCC GCCGGCCAAG GTGATTGGCG CCGTGGAGGA AATGGGCATC AAGGTCACCC ACACCTACGG CCTGACCGAG GTCTACGGCC CGGTGACCGT GTGTGCCTGG CATGACGAAT GGGATGCGCT GTCGCTGGAC GAGCGTGCGC GGATCAAGTC GCGCCAGGGC GTACGCTACC CGACCCTGGA CGGCCTGATG GTCGCCGACC CGCAAACCCT CCAGCCGGTG CCGCGCGACG GCAACACCCT GGGCGAAATT TTCATGCGCG GCAATACCGT GATGAAGGGC TACCTGAAAA ACCCTGAAGC CACCGCCGAA GCCTTCCGTG GCGGCTGGTT CCACACCGGC GACCTGGCCG TATGGCATGC CGACGGATAT GTCGAAATCA AGGACCGGCT CAAGGACATC ATCATTTCCG GTGGCGAGAA CATTTCCACC ATCGAGGTCG AAGACGCCCT CTACAAGCAC CCGGCTGTAC TGGAAGCCGC CGTGGTGGCA CGCCCGGATG AAAAGTGGGG CGAAACGCCG TGCGCCTTCG TTGCCCTCAA GCCGGGCCGG GAAGACACCC GCGAGACCGA TATCACCAGT TGGTGCCGCG AGCACCTGGC CGGGTTCAAG GTGCCGAAGA CCGTGGTGTT TGGTGAGCTG CCCAAAACCT CCACCGGCAA GATCCAGAAG TACGTGCTGC GCGACCGGGC CAAGGCCCTC TGA
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Protein sequence | MSIYAQGLMP AAVNHVALTP LSFIERTAAV YGNYPAVIHG AIRRNWQETY QRCLRLASAL AGRGIGRGDT VAVMLPNTPA MLEAHFGVPM IGAVLNTLNV RLDAEAIAFM LQHGEAKVLI TDREFHAVIE AALALLEHPP LVIDVDDPEY GEGRAVSELD YEALLAEGDP DFAWEWPDDE WQAISLNYTS GTTGNPKGVV YHHRGAYLNA LGNQMTWAMG HRPVYLWTLP MFHCNGWCYP WTITALAGTH VFLRRVDPQK ILTLIREHRV SHLCGAPIVL NALVNMPEAA KAAIEHPVQA MVAGAAPPAK VIGAVEEMGI KVTHTYGLTE VYGPVTVCAW HDEWDALSLD ERARIKSRQG VRYPTLDGLM VADPQTLQPV PRDGNTLGEI FMRGNTVMKG YLKNPEATAE AFRGGWFHTG DLAVWHADGY VEIKDRLKDI IISGGENIST IEVEDALYKH PAVLEAAVVA RPDEKWGETP CAFVALKPGR EDTRETDITS WCREHLAGFK VPKTVVFGEL PKTSTGKIQK YVLRDRAKAL
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