| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_2364 |
|---|
| Symbol | |
|---|
| ID | 5870153 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida GB-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010322 |
|---|
| Strand | + |
|---|
| Start bp | 2642930 |
|---|
| End bp | 2644834 |
|---|
| Gene Length | 1905 bp |
|---|
| Protein Length | 634 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 641547488 |
|---|
| Product | peptidase S8/S53 subtilisin kexin sedolisin |
|---|
| Protein accession | YP_001668600 |
|---|
| Protein GI | 167033369 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 37 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGCTGG ATTTACATTT CGTGTATTAC CGCAACTTTC GTTTCGATGG AAAACTTCAT
GTTCGCTGTT ACGGTGCAGA CCTGCACAAG GTCAATCGCA TCCGCTACGA ACTTGAACGG
GCTGGCCCCG ACGGCCCGGT TTCATTCCCG GGAAAGTCCG TGTACTCCCA GGCACGCAGC
GGCAAGCCGA GCGACCATGG ATGCCCTGCC ACGTTGCTGG CCGAAGAAGA GGCGGGCGTG
TATTCGATCC AGCCCAAAGT CGTGCTGCTC GATGCGCATG CTCGGGCGCT GGGCCGGCCG
GTTGGCGCAG CTGGCGTTAT CGACATGCGG CCCTTGGTGC TCGACATAAA GGCTGACGAG
GTCAACAGGA GCATCCTCGA CAAGGTGCCG GTACCCGGTG CTGGCGGGCG TCGTAAACGA
GCCGTGGAGC AGGTGCAGGG AGGCGACGAT GGGCCGCAAG GGATGCCCAC CTTGGCACCC
GGCACACCGT TCCCGCCGGT TGTCATCGAA TTCATCCCCG GAGGGCACGA GCGATTTCTC
CGAGAGCTGG AGCCGGGCTC AGGTTCTGCA TGGGTCCGCT ACTGGCCGAA CCTTGAATCG
GTACTCGCGT TGCGACCTGT TCTGGACGCA CAGGAACAGG GCGAAGACAG GCTCCGGCCA
TTGCGCGACC ATTACATTCT CGACCAGCCA GCCAGCATGC TCGGTGACAC CTACCTCGCC
TTGCTCAAGT CTTTGGCGGC GCGGGAGTAT GTGCAGTCAC TGCAGTTCAT GCCGGCAGCG
CCCCAGCCAA ACCTAATTTT GCTCGGCCTG GCCGGGCTAC TGGCAACGCT GCTGACCGGC
GGCGCCGTGG TGGCGGGCAA CCATGCCTAT GAAAATGCTC AAGCCACACC CGATTTCGAG
CCGCGCCAGC ATTACCTCGA CGCACCTGGC CCCCGGTGGC AAGGGCTGAA TGTGCGCGAG
GCCTGGGCGC AGCAGGTAAC GGGTTACGGC GCGCGGATTC ACTTCAGTGA TGGGGGGTTG
CACCCTGATC ATGAAGACTT GCGCGGCAAT CCTGCCTTGA AAATCGTCTC GCTCGAACCC
AACCATGATC CCGACCACGG AACGGCTTCG GTGGGAATCA TTCTGGCTGC GGGCAACGGT
ATTGGCGCGA CCGGGATCAG CCGTAACAGC GAACTGTACC TGTACAACAA CCGCGCGGAG
GATGCCCAAG GCAGCTTCCA GGCGCTCAAG GACCTGCTAC GGAATGTAGA ACCCGGCGAC
ATCGTGGGTA TCAATCGGCA GACCGCCCAT GCCGAGGTGC TGAGTACCAT GTTGCCATCC
TTGCACGACA AGGCCTGGTG GACTGTCATG CAGCAGTTGA GCCGGCGCGG TGCCGTGGTG
GTCAATGCAG CAGCCAATGG CAGCAGCAGG ACGCTTGCGG ACAAAGGCAC CCGTGCTGGC
GAAGGTGTCG ACCTGGCCAA CTGGCCCTAT TTTGCCGACC ATGGCGATTC AGGTGCGATT
CTGGTGGGGG CCTGCCATTC GTATGACGGC AAGCCCCACG CCTACTCCAA TCACCATTAC
CGTTACCGTA TGCTCAATGC CTGGGGCGAC AGCGTAGTCA CGCTTTCCTA TGGCGATTTG
CAGGACCTGC GTGGTGAGGA AAGGGACTAC ACAGGCCGCT ATGCTGGCAC TTCCAGCGCC
ACGCCGATGG TGTGCGGTGC ATTGAGCCTG ATCCAGTCCT ACGCCATGGA GCAGCACCAC
GTCTACCTCA ATGGCAACCA GATGCATCAG TTGGTCATGG CGTCTGGCTA CGACGATGCC
ACGTTAGCGG GTACCGAGGT GCTGCCGATG GGCGCCAGGC CCAATGTGCA TGGCGCGCTG
GTGCTGCTGG ACCGCATCCT CGGCGGCGGC AGGTTCGCGG CCTGA
|
|---|
| Protein sequence | MTLDLHFVYY RNFRFDGKLH VRCYGADLHK VNRIRYELER AGPDGPVSFP GKSVYSQARS
GKPSDHGCPA TLLAEEEAGV YSIQPKVVLL DAHARALGRP VGAAGVIDMR PLVLDIKADE
VNRSILDKVP VPGAGGRRKR AVEQVQGGDD GPQGMPTLAP GTPFPPVVIE FIPGGHERFL
RELEPGSGSA WVRYWPNLES VLALRPVLDA QEQGEDRLRP LRDHYILDQP ASMLGDTYLA
LLKSLAAREY VQSLQFMPAA PQPNLILLGL AGLLATLLTG GAVVAGNHAY ENAQATPDFE
PRQHYLDAPG PRWQGLNVRE AWAQQVTGYG ARIHFSDGGL HPDHEDLRGN PALKIVSLEP
NHDPDHGTAS VGIILAAGNG IGATGISRNS ELYLYNNRAE DAQGSFQALK DLLRNVEPGD
IVGINRQTAH AEVLSTMLPS LHDKAWWTVM QQLSRRGAVV VNAAANGSSR TLADKGTRAG
EGVDLANWPY FADHGDSGAI LVGACHSYDG KPHAYSNHHY RYRMLNAWGD SVVTLSYGDL
QDLRGEERDY TGRYAGTSSA TPMVCGALSL IQSYAMEQHH VYLNGNQMHQ LVMASGYDDA
TLAGTEVLPM GARPNVHGAL VLLDRILGGG RFAA
|
|---|
| |