| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_2351 |
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| Symbol | |
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| ID | 5870140 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 2628851 |
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| End bp | 2630119 |
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| Gene Length | 1269 bp |
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| Protein Length | 422 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641547475 |
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| Product | carbohydrate-selective porin OprB |
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| Protein accession | YP_001668587 |
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| Protein GI | 167033356 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3659] Carbohydrate-selective porin |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.348926 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCATCCG CAATTCGCAT CACCCCCACC CTGCTGCTGG CCCTGGCCAG CACCACAGCC
CTGGCCGACG GCGACCTGCT GACCCGCAGC ACCCTGACCG GTGACTGGGG CGGCCTGCGT
CATCAACTCG AAGAAGACGG CGTCAAAGTC ACCGGTGACT ACAGCGGCGA AACCGCCTAC
AACGCCCACG GTGGTTTGCA CCGATCGGCG CGCTATTCGC AGAACGTCAA GCTGGGCGTG
CAGTTCGACC TGTCGAAGCT GTACGGCCTG GACAACGGCG GCAAAGTCCA GCTGACCGTC
AACGACCGCC GCGGTAACAG CGCGTCGGAA GACCTGGTAG GCAACCGCCT GCCGATCCAG
GAAAACTTCG GTGGCCTGTA CACCCGCCTG ACCGAGCTGA GCTACGAGCG TACCCTGTTC
ACTCCGGCGC TCAACGTTAA GCTTGGCTAC ATGGCCATGG GCAACGACCT CGGCGGCCTG
GACAGCGGCA TCCTGTGCAA CTTCATGAAC GCCGGCTTCT GCGGCCACCC GCTGAACATG
TCCGGTGGCA GCGGCTGGAC CAACTACCCC AATGCTCACC TCGGCGTGCG GGTGAAGTAC
GACCTGTCGC CTTCCTGGCA GCTGCGCGTG GCGGCGTTCA ACGTCGACCC CGAGAGCAAC
GGCAACTCCA GCCGCGCCTG GCACCTGGGG CCCAAGCACA CCACCGGCAC CGTGGTACCG
GTGGAGCTGG TGTACAAGCT GCAGGGTGAA CTGCCGGGCG AGTACAAGCT CGGTTACTAC
TACGACAGCT CCGACGTGAA ACGCATCGGC AGCGACGACG AAGTATCCGG CCGCTCAGGC
CACTACCTGC TGGTCGACCA GGCGGTATGG AACGACCAGG GCTCGCCAGG CCGTAGCCTG
CACGCCTTCG GCCAGTACTC GGCGTCGAGC AAGGCCGCCT CGCCGTTCAC CAAGTGGTAT
GGTGCCGGTG TGGTGCTGTA CAAACCGTTC GAAGGCCGCC CGAAAGATAC CGTGGCACTG
GGTTACGGCC GTGCCGTGCC TAATCCGCGT AGCCGCGATG TGCTTGAAGA TGCCGCCTTC
AACGCTGGCC AGCAGTTCCC CGATATCGAC AGTGCCGAGC AGTTGATCGA ACTGAGTTAT
GGCTACCAGG CCACACCGTG GCTGAACCTG CGCCCAGATG TGCAATACAT CATCGAGCCA
GGGGCGTTCT CGGGGAAGGA CATCGACAAC GCGCTGGTGG TGGGCCTGCA GGTCAAGGCT
ACCTTCTGA
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| Protein sequence | MPSAIRITPT LLLALASTTA LADGDLLTRS TLTGDWGGLR HQLEEDGVKV TGDYSGETAY
NAHGGLHRSA RYSQNVKLGV QFDLSKLYGL DNGGKVQLTV NDRRGNSASE DLVGNRLPIQ
ENFGGLYTRL TELSYERTLF TPALNVKLGY MAMGNDLGGL DSGILCNFMN AGFCGHPLNM
SGGSGWTNYP NAHLGVRVKY DLSPSWQLRV AAFNVDPESN GNSSRAWHLG PKHTTGTVVP
VELVYKLQGE LPGEYKLGYY YDSSDVKRIG SDDEVSGRSG HYLLVDQAVW NDQGSPGRSL
HAFGQYSASS KAASPFTKWY GAGVVLYKPF EGRPKDTVAL GYGRAVPNPR SRDVLEDAAF
NAGQQFPDID SAEQLIELSY GYQATPWLNL RPDVQYIIEP GAFSGKDIDN ALVVGLQVKA
TF
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