Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_2318 |
Symbol | |
ID | 5870107 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | - |
Start bp | 2584482 |
End bp | 2585291 |
Gene Length | 810 bp |
Protein Length | 269 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 641547443 |
Product | peptidase C26 |
Protein accession | YP_001668555 |
Protein GI | 167033324 |
COG category | [R] General function prediction only |
COG ID | [COG2071] Predicted glutamine amidotransferases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.167061 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 45 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCAACA GCAACATTGG CAACAAGCAA CCTTCCCTGC GCAAACCCGT CGTCCTGATG ACCATGGGCA GCCAAGAGCG CAAAGGCCAT GACTATCAGG TCATGACCCA CAAATACATC ACCCCGCTGG TCGAGTTTTC CGATTGCGTC CCGGTACTGG TGCCCACCTG CTGCGGCATT GAGGACCTCG AGACCTACCT GGACATGGCC GACGGCGTGT ACCTGACGGG CGCTGGCAGC AACATCGACC CGGCCCTGTA TGGCCAGAAA AATGAAACCC CAGGCAAGGG TCAGGACCAG AACCGCGACC TGTTCGACAT CCCACTGGTC AAGGCGGCGA TCAAGCGTGG CCTGCCAATC TTCGGCATTT GCCGTGGCAT GCAGGAAATC AACGTGGCCC TGGGTGGCGA CATCTACCAG AAGGTCTACG CCGAGCCTGG CTTCAATGAC CACCGGGAAA ACCCGGAAGA CCCGGTTGAA GTGCAGTACG CCCAGGTACA TGGGGTGAAG ATCCAGCCGG GCAGCTGGCT GCGTGACACC CTGGGTACCG ACGAGATTCG CGTCAACTCG CTGCATGGCC AGGGCCTGCA CAAGCTCGGC GCCGGTATCG AAGCTATCGC CCATGCTGAA GATGGCCTGG TTGAAGCGAT TCACGCGCCG AGCATTTCGC CGTTCCTGTT CGCCGTACAG TGGCACCCAG AATGGCAAGC GGCGAAGAAC CCTGATTCGA TCAAGATCTT CCAGGCTTTC GGCGATGCCT GCCGAGCCCA GGTACGCAAG GCGCAGGTCA AGCGCCAGCA CGCTGCCTGA
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Protein sequence | MSNSNIGNKQ PSLRKPVVLM TMGSQERKGH DYQVMTHKYI TPLVEFSDCV PVLVPTCCGI EDLETYLDMA DGVYLTGAGS NIDPALYGQK NETPGKGQDQ NRDLFDIPLV KAAIKRGLPI FGICRGMQEI NVALGGDIYQ KVYAEPGFND HRENPEDPVE VQYAQVHGVK IQPGSWLRDT LGTDEIRVNS LHGQGLHKLG AGIEAIAHAE DGLVEAIHAP SISPFLFAVQ WHPEWQAAKN PDSIKIFQAF GDACRAQVRK AQVKRQHAA
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