Gene PputGB1_2318 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_2318 
Symbol 
ID5870107 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp2584482 
End bp2585291 
Gene Length810 bp 
Protein Length269 aa 
Translation table11 
GC content60% 
IMG OID641547443 
Productpeptidase C26 
Protein accessionYP_001668555 
Protein GI167033324 
COG category[R] General function prediction only 
COG ID[COG2071] Predicted glutamine amidotransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.167061 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCAACA GCAACATTGG CAACAAGCAA CCTTCCCTGC GCAAACCCGT CGTCCTGATG 
ACCATGGGCA GCCAAGAGCG CAAAGGCCAT GACTATCAGG TCATGACCCA CAAATACATC
ACCCCGCTGG TCGAGTTTTC CGATTGCGTC CCGGTACTGG TGCCCACCTG CTGCGGCATT
GAGGACCTCG AGACCTACCT GGACATGGCC GACGGCGTGT ACCTGACGGG CGCTGGCAGC
AACATCGACC CGGCCCTGTA TGGCCAGAAA AATGAAACCC CAGGCAAGGG TCAGGACCAG
AACCGCGACC TGTTCGACAT CCCACTGGTC AAGGCGGCGA TCAAGCGTGG CCTGCCAATC
TTCGGCATTT GCCGTGGCAT GCAGGAAATC AACGTGGCCC TGGGTGGCGA CATCTACCAG
AAGGTCTACG CCGAGCCTGG CTTCAATGAC CACCGGGAAA ACCCGGAAGA CCCGGTTGAA
GTGCAGTACG CCCAGGTACA TGGGGTGAAG ATCCAGCCGG GCAGCTGGCT GCGTGACACC
CTGGGTACCG ACGAGATTCG CGTCAACTCG CTGCATGGCC AGGGCCTGCA CAAGCTCGGC
GCCGGTATCG AAGCTATCGC CCATGCTGAA GATGGCCTGG TTGAAGCGAT TCACGCGCCG
AGCATTTCGC CGTTCCTGTT CGCCGTACAG TGGCACCCAG AATGGCAAGC GGCGAAGAAC
CCTGATTCGA TCAAGATCTT CCAGGCTTTC GGCGATGCCT GCCGAGCCCA GGTACGCAAG
GCGCAGGTCA AGCGCCAGCA CGCTGCCTGA
 
Protein sequence
MSNSNIGNKQ PSLRKPVVLM TMGSQERKGH DYQVMTHKYI TPLVEFSDCV PVLVPTCCGI 
EDLETYLDMA DGVYLTGAGS NIDPALYGQK NETPGKGQDQ NRDLFDIPLV KAAIKRGLPI
FGICRGMQEI NVALGGDIYQ KVYAEPGFND HRENPEDPVE VQYAQVHGVK IQPGSWLRDT
LGTDEIRVNS LHGQGLHKLG AGIEAIAHAE DGLVEAIHAP SISPFLFAVQ WHPEWQAAKN
PDSIKIFQAF GDACRAQVRK AQVKRQHAA