Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_2242 |
Symbol | |
ID | 5870031 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | - |
Start bp | 2502539 |
End bp | 2503600 |
Gene Length | 1062 bp |
Protein Length | 353 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641547367 |
Product | hypothetical protein |
Protein accession | YP_001668479 |
Protein GI | 167033248 |
COG category | [S] Function unknown |
COG ID | [COG2855] Predicted membrane protein |
TIGRFAM ID | [TIGR00698] conserved hypothetical integral membrane protein |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 42 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCCACGG TTCCGTCCAA CCCTGCCTTT GCCCCTACCC TCTCCACCCG AGGGCGGCTC AATGGCATCC TGTTCGTCGC GCTGTTCGCG CTTGCAGTCA CTCAACTGGC TGCCCTGCCC GCCATCGCCA ACCTGGGCAT CAGCCCATTG ATCGTCGGTA TCGTCGCCGG TGCACTGTAT GGCAACGCGC TGCGAGACGG TGTACCGGCA AGCTGGGCGG CAGGTATCAA CTTTTCCGCT CGCGGCCTGT TGCGCATCGC CGTGGCATTC TTCGGCCTGC GGGTAAGCCT GCAGGAAATT GCCGAGGTCG GCTGGTCGGG GCTCATCGTG TCGGTGCTGG TGGTGTCCAG CACCCTGCTG ATCGGCCTGT GGTGCGGCAT GAAAGTATTC AAGCTGGACC GCGATACTGC CTTGCTGACC GCCGCCGGCA GCGCCATCTG CGGCGCCGCC GCCGTGCTGG CATTCGAATC GGCGCTGCGC AGCGCCCCGC ATAAAAGCGC CATGGCGGTC GGTAGCGTGG TGCTGTTCGG TACCTTGTCG ATGTTCCTTT ACCCACTGGC GATCAACGCC GGCTGGCTGC ACCTTGACAC CATGGGCGCC GGGCTTTTGC TGGGCGGCAC CATCCACGAA GTGGCGCAGG TGGTCGGCGC GGCCAGCAAC GTCAGCCCCG AGGCCACGCA CATCGCCACC ATCGTCAAGA TGACCCGGGT CATGCTGCTG GTGCCGGTGC TGCTGGTGGT GGGCCTGTGG ATCAGCCGTT CACGCCAGGC TGGCCTGGCG CAGGGCAACG GGCGCATCGC CATGCCTTGG TTCGCCTTCG GCTTCCTTGC TCTGGTGCTG GTCAATTCGC TGCAGGTGCT GCCCGGCAGC GTGACCCAGG CGGTGAACAG CCTGGACACC TTTGCCTTGA CCATGGCCAT GACTGCATTG GGCATGGAAA CCCGCTTCAG CCAGATCCGC CAGGCCGGGC CAAAGGCCCT GGCCACCGGG GCAATTCTGA ACCTGTGGCT GGTCGGGGGT GGGCTGGCCA TTACCTTCGG TGTGCAGAAG CTGCTGGGAT GA
|
Protein sequence | MATVPSNPAF APTLSTRGRL NGILFVALFA LAVTQLAALP AIANLGISPL IVGIVAGALY GNALRDGVPA SWAAGINFSA RGLLRIAVAF FGLRVSLQEI AEVGWSGLIV SVLVVSSTLL IGLWCGMKVF KLDRDTALLT AAGSAICGAA AVLAFESALR SAPHKSAMAV GSVVLFGTLS MFLYPLAINA GWLHLDTMGA GLLLGGTIHE VAQVVGAASN VSPEATHIAT IVKMTRVMLL VPVLLVVGLW ISRSRQAGLA QGNGRIAMPW FAFGFLALVL VNSLQVLPGS VTQAVNSLDT FALTMAMTAL GMETRFSQIR QAGPKALATG AILNLWLVGG GLAITFGVQK LLG
|
| |