| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_2233 |
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| Symbol | |
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| ID | 5870022 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 2492124 |
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| End bp | 2493458 |
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| Gene Length | 1335 bp |
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| Protein Length | 444 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641547358 |
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| Product | general substrate transporter |
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| Protein accession | YP_001668470 |
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| Protein GI | 167033239 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00883] metabolite-proton symporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 0.527639 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCAGCA CCACCCTGAA TCCCTCCACC TTCGAAGGCC CTGCGCACAA CACCGAACGC
CAGGCCTTGC GCAAGGCCGC ACGGGCCAGC TTCATGGGCA ATTTCGTCGA GTGGTTCGAC
TACGCTGCCT ACGGCTATCT GGCCACCATC ATCGCCGCCA CGTTCTTCCC GCAGACCGAC
AAGACCACCG GCCTGCTGGC GACCTTTGCG GTATTTGCCC TGTCGTTCCT GGTACGCCCG
CTGGGCGGCA TTGTCTGGGG GCATTTCGGT GACCGCCATG GCCGGCGCAA TGCGTTGTCG
TGGTCGATCC TGATCATGTC GGTGTCCACC TTCTGCATCG GCCTGTTGCC CGGTTATGCG
CAAATCGGCC TGTGGGCGCC GGGCTTGTTG CTGTTGATAC GCCTGGTGCA GGGCTTTTCC
GCCTCGGGCG AGTACGCCGG TGCTGCGGCG TTCCTGGCGG AATACGCGCC ACCTGGCCGG
CGGGGTTTGT ACACCAGCAT CGTGCCGGCC AGCACGGCGG CGGGGCTGCT GTTCGGGGCG
GCGTTCGTCG CGGTGCTGCA CGAGCTGCTC AGCAATGAGG CTCTGCACGA GTGGGGCTGG
CGCTTGCCGT TTCTGTTGGC CGCGCCGTTC GGCCTGGTGG GGCGCTACAT CCGCATGAGC
CTGCAAGACA CGCCCAAGTT CCTGGAGATG GAGCAGCGCC TGGAGCACAA GGCCGGCATG
GCCCCGACAC CGCTGCGCGA ACTGCTGGGC CAGCACCGGC GCAGCCTGGC CATCGGTATT
GGTGTCACCT GCCTGAACGC GGTGGCGTTC TACCTGTTGC TCAGCTACAT GCCGACCTAC
CTGTCCAGTG AAATGGGCAT GAGCGAGCGG GATTCGTTCA TCGCTTCGAC GGTGTCGCTG
GCCACGTACA TCGGCTTGAT TTTCCTGATG GGGCGGCTGT CCGACCAGTT TGGTCGCAAG
ACCATGCTGG TGGTGGCTTC GCTGTTGTTC CTGGGGTTGA CCGTGCCGTT GTTCCGCCTG
CTCGACGGGC AGCCGTTGCT GGTGATTCTG ACGATCCAGA TTGTTTTCGG GGCGATGTTG
GCAATGAATG ACGGGACCTT GCCGTGCCTG CTGGCGGAAA TCTTCCCCAC CCGTGTGCGT
TTCAGTGGCT TTGCCCTGAG TTTCAATGTG GCCAATGCGC TGTTTGGCGG GACAGCGCCG
TTCATTGCCA CCTGGTTGAT ACAGGTGACC GGCAGCAAGC TGGCACCGGC GGGGTATTTG
CTGGCGGCAG CGTTGGTTGC TCTGGTGGCC ATGCTGATGT GCCGGGAGAC GGCCCACACG
GCCCTGGAGG ATTGA
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| Protein sequence | MSSTTLNPST FEGPAHNTER QALRKAARAS FMGNFVEWFD YAAYGYLATI IAATFFPQTD
KTTGLLATFA VFALSFLVRP LGGIVWGHFG DRHGRRNALS WSILIMSVST FCIGLLPGYA
QIGLWAPGLL LLIRLVQGFS ASGEYAGAAA FLAEYAPPGR RGLYTSIVPA STAAGLLFGA
AFVAVLHELL SNEALHEWGW RLPFLLAAPF GLVGRYIRMS LQDTPKFLEM EQRLEHKAGM
APTPLRELLG QHRRSLAIGI GVTCLNAVAF YLLLSYMPTY LSSEMGMSER DSFIASTVSL
ATYIGLIFLM GRLSDQFGRK TMLVVASLLF LGLTVPLFRL LDGQPLLVIL TIQIVFGAML
AMNDGTLPCL LAEIFPTRVR FSGFALSFNV ANALFGGTAP FIATWLIQVT GSKLAPAGYL
LAAALVALVA MLMCRETAHT ALED
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