| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_2200 |
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| Symbol | |
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| ID | 5869989 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 2456203 |
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| End bp | 2457606 |
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| Gene Length | 1404 bp |
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| Protein Length | 467 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641547325 |
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| Product | amino acid permease-associated region |
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| Protein accession | YP_001668437 |
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| Protein GI | 167033206 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1113] Gamma-aminobutyrate permease and related permeases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAGACA TGTCCGCAAG CCTTGAGCAA AGCAAACCGG CAGAGCCCGC CCGTGACGGG
CACCTGCAAC GCACGCTGGA AAACCGCCAC ATCCAGCTGA TTTCCATCGG AGGCGCCATC
GGCACCGGCC TGTTCATGGG GTCGGGCAAG GTGATCGCGC TGTCCGGTAC CTCGATCCTT
CTGGTCTACG CCATCCTCGG GTTCTTCGTC TTCTTCGTGA TGCGCGCCAT GGGCGAGCTG
CTGTTGTCCG ACCTGCGCTT CAAGTCGTTC GCCGACATCG TTGCCCATTA CCTGGGCCCG
CGCGCCGGCT TTGTGCTGAG CTGGTCGTAC TGGCTGAGCT GGAGCGTGGC GGTGGTCGGC
GACGTGGTCG TGGTGGCGGG GTTCTTTCAG TATTGGTACC CCGATGCACC GGCCTGGCTA
CCCGCGTTCT TCACCCTGTT CGTGCTGCTG GGGTTGAACC TGCTGGCGGT GCGCATATTC
GGCGAGGTGG AGTTCTGGTT CGGTATCATC AAGATCGTCG CCATCGTGCT GTTGATCATC
ACGGCGGCGG TGATGATCGC TACCTCTTAT ACCTCGCCCA ATGGTGTGGT CGCCTCGCTG
TCCAACGTGG TCGCGCCGGG TGCGGTGCTG CCCCATGGCA TCAGCGGTTT CTTTGCCGGG
TTCCAGATTG CCGTGTTTTC TTTCGCCGGT ACCGAACTGA TCGGCACCAC CGCCGCCGAG
GCCAAGAACC CGCATCGCTC GCTGCCCAAG GCGATCAACA CCATCCCGCT GCGCATCCTG
CTGTTCTACA TCCTGGCGCT GGTGTGCATC ATCAGCGTGG TGTCGTGGGC CGAAGTGCCG
GCCAACCGCA GCCCCTTCGT CGAACTGTTC CTGCTGGCGG GTTTTCCGGC GGCGGCGGGC
ATGATCAATT TCGTGGTGCT GACGTCAGCT GCGTCATCGG CCAACAGTGG GGTGTACTCG
GGTTGCCGGA TGTTGTTCGG CCTGGCCGAG CGGCGTAACG CACCGGCCCT GTTCGCCAGG
CTTTCGGCAC TGAGCGTGCC GGTGTACAGC CTGGTGTTTT CCGGGGTGTG CATGTTGATC
GGGTTGAGCT TGCTGTTCAT CATTCCCGAG GTGATGACCG TGTTCACGCT GATCTCGACG
GTGTCGGCGA TTTTGGTGAT CTTCACCTGG TCGATGATCC TTGCTGCGTA CCTGGCTTAT
CGCAGACTCA ACCCGGCTGC GCACGACGCC TCGCTGTTCA AGTTGCCGGG CGGGGTGCCG
ATGGCAGTCA CGACCTTGGG CTTTCTCGGC TTTGTGCTGG TGCTGCTGGC GCTGCAGCCG
GATACCCGGT TGGCGCTATG CGTGATGCCG TTGTGGTTCG TGTTTTTGCT GGTGGCTTAC
CATCGTCGCC GTGAGCACAA TTAA
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| Protein sequence | MQDMSASLEQ SKPAEPARDG HLQRTLENRH IQLISIGGAI GTGLFMGSGK VIALSGTSIL
LVYAILGFFV FFVMRAMGEL LLSDLRFKSF ADIVAHYLGP RAGFVLSWSY WLSWSVAVVG
DVVVVAGFFQ YWYPDAPAWL PAFFTLFVLL GLNLLAVRIF GEVEFWFGII KIVAIVLLII
TAAVMIATSY TSPNGVVASL SNVVAPGAVL PHGISGFFAG FQIAVFSFAG TELIGTTAAE
AKNPHRSLPK AINTIPLRIL LFYILALVCI ISVVSWAEVP ANRSPFVELF LLAGFPAAAG
MINFVVLTSA ASSANSGVYS GCRMLFGLAE RRNAPALFAR LSALSVPVYS LVFSGVCMLI
GLSLLFIIPE VMTVFTLIST VSAILVIFTW SMILAAYLAY RRLNPAAHDA SLFKLPGGVP
MAVTTLGFLG FVLVLLALQP DTRLALCVMP LWFVFLLVAY HRRREHN
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